Protein Family : Small nuclear ribonucleoprotein family protein 124247963

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  24

24 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29986.t000008 (1 of 1) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM // SUBFAMILY NOT NAMED R. communis v0.1 2325   29986: 40792-43116
orange1.1g031921m.g (1 of 1) KOG3293 - Small nuclear ribonucleoprotein (snRNP) C. sinensis v1.1 2360   scaffold00149: 192696-195055
orange1.1g031941m.g (1 of 1) KOG3482 - Small nuclear ribonucleoprotein (snRNP) SMF C. sinensis v1.1 2707   scaffold00001: 5214097-5216803
AT5G27720 (1 of 1) K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) A. thaliana TAIR10 emb1644 2044   Chr5: 9815556-9817599
Thhalv10021732m.g (1 of 1) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM E. salsugineum v1.0 2560   scaffold_13: 7792743-7795302
Ciclev10002769m.g (1 of 1) KOG3293 - Small nuclear ribonucleoprotein (snRNP) C. clementina v1.0 2395   scaffold_5: 27430780-27433174
Ciclev10022685m.g (1 of 1) KOG3428//KOG3448//KOG3482 - Small nuclear ribonucleoprotein SMD1 and related snRNPs // Predicted snRNP core protein // Small nuclear ribonucleoprotein (snRNP) SMF C. clementina v1.0 2777   scaffold_3: 45676507-45679283
Gorai.004G052500 (1 of 1) KOG3428//KOG3448//KOG3482 - Small nuclear ribonucleoprotein SMD1 and related snRNPs // Predicted snRNP core protein // Small nuclear ribonucleoprotein (snRNP) SMF G. raimondii v2.1 2935   Chr04: 4812215-4815149
Thecc1EG004631 (1 of 1) K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) T. cacao v1.1 2783   scaffold_1: 32712781-32715563
Cagra.14151s0005 (1 of 1) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM C. grandiflora v1.1 2049   Scaffold14151: 13770-15818
Brara.F02848 (1 of 3) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM B. rapa FPsc v1.3 1827   A06: 23229561-23231387
Brara.A03716 (1 of 3) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM B. rapa FPsc v1.3 1710   A01: 29767724-29769433
Brara.I00458 (1 of 3) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM B. rapa FPsc v1.3 1838   A09: 2596319-2598156
Bostr.29827s0093 (1 of 1) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM B. stricta v1.2 2123   Scaffold29827: 1154986-1157108
SapurV1A.0052s0650 (1 of 2) K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) S. purpurea v1.0 2767   chr14: 9946119-9948885
SapurV1A.0155s0260 (1 of 2) K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) S. purpurea v1.0 2390   chr02: 18422130-18424519
Manes.05G063400 (1 of 2) KOG3428//KOG3448//KOG3482 - Small nuclear ribonucleoprotein SMD1 and related snRNPs // Predicted snRNP core protein // Small nuclear ribonucleoprotein (snRNP) SMF M. esculenta v6.1 2720   Chromosome05: 4860731-4863450
Manes.01G217600 (1 of 2) KOG3428//KOG3448//KOG3482 - Small nuclear ribonucleoprotein SMD1 and related snRNPs // Predicted snRNP core protein // Small nuclear ribonucleoprotein (snRNP) SMF M. esculenta v6.1 4872   Chromosome01: 30599299-30604170
AL6G39230 (1 of 1) K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) A. lyrata v2.1 1961   scaffold_6: 12660108-12662068
Potri.002G205700 (1 of 2) K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) P. trichocarpa v3.1 2533   Chr02: 16888768-16891300
Potri.014G130700 (1 of 2) K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) P. trichocarpa v3.1 2541   Chr14: 9964834-9967374
Podel.14G137300 (1 of 2) K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) P. deltoides WV94 v2.1 2851   Chr14: 9972337-9975187
Podel.02G228300 (1 of 2) K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) P. deltoides WV94 v2.1 2590   Chr02: 19372480-19375069
Carub.0006s2485 (1 of 1) K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) C. rubella v1.1 2101   scaffold_6: 9531776-9533876

24 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g031941m C. sinensis v1.1 124247963 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Thhalv10021732m E. salsugineum v1.0 124247963 Small nuclear ribonucleoprotein family protein 1 5268 Malvidae
Gorai.004G052500.1 G. raimondii v2.1 124247963 Small nuclear ribonucleoprotein family protein 1 5268 Malvidae
Cagra.14151s0005.1.p C. grandiflora v1.1 124247963 Small nuclear ribonucleoprotein family protein 1 5268 Malvidae
Bostr.29827s0093.1.p B. stricta v1.2 124247963 Small nuclear ribonucleoprotein family protein 1 5268 Malvidae
Manes.05G063400.1.p M. esculenta v6.1 124247963 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Potri.002G205700.1.p P. trichocarpa v3.1 124247963 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
29986.m001592 R. communis v0.1 124247963 Small nuclear ribonucleoprotein family protein 1 5268 Malvidae
orange1.1g031921m C. sinensis v1.1 124247963 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
AT5G27720.1 A. thaliana TAIR10 124247963 Small nuclear ribonucleoprotein family protein 1 5268 Malvidae
Ciclev10022685m C. clementina v1.0 124247963 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Ciclev10002769m C. clementina v1.0 124247963 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Thecc1EG004631t3 T. cacao v1.1 124247963 Small nuclear ribonucleoprotein family protein 1 5268 Malvidae
Brara.I00458.1.p B. rapa FPsc v1.3 124247963 Small nuclear ribonucleoprotein family protein 3 5268 Malvidae
Brara.F02848.1.p B. rapa FPsc v1.3 124247963 Small nuclear ribonucleoprotein family protein 3 5268 Malvidae
Brara.A03716.1.p B. rapa FPsc v1.3 124247963 Small nuclear ribonucleoprotein family protein 3 5268 Malvidae
SapurV1A.0155s0260.1.p S. purpurea v1.0 124247963 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
SapurV1A.0052s0650.1.p S. purpurea v1.0 124247963 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Manes.01G217600.1.p M. esculenta v6.1 124247963 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
AL6G39230.t1 A. lyrata v2.1 124247963 Small nuclear ribonucleoprotein family protein 1 5268 Malvidae
Potri.014G130700.1.p P. trichocarpa v3.1 124247963 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Podel.14G137300.1.p P. deltoides WV94 v2.1 124247963 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Podel.02G228300.1.p P. deltoides WV94 v2.1 124247963 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Carub.0006s2485.1.p C. rubella v1.1 124247963 Small nuclear ribonucleoprotein family protein 1 5268 Malvidae