Gene : Cagra.14151s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM Genomic Order:  5
Name:  ? Cagra.14151s0005 Secondary Identifier:  ? PAC:28900516
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.14151s0005 0.5kb upstream 0.5kb upstream 2549 true Scaffold14151: 13770-16318 Capsella grandiflora
Cagra.14151s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold14151: 15819-16318 Capsella grandiflora
Cagra.14151s0005 0.5kb downstream 0.5kb downstream 2549 true Scaffold14151: 13270-15818 Capsella grandiflora
Cagra.14151s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold14151: 13270-13769 Capsella grandiflora
Cagra.14151s0005 1.0kb upstream 1.0kb upstream 3049 true Scaffold14151: 13770-16818 Capsella grandiflora
Cagra.14151s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold14151: 15819-16818 Capsella grandiflora
Cagra.14151s0005 1.0kb downstream 1.0kb downstream 3049 true Scaffold14151: 12770-15818 Capsella grandiflora
Cagra.14151s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold14151: 12770-13769 Capsella grandiflora
Cagra.14151s0005 2.0kb upstream 2.0kb upstream 4049 true Scaffold14151: 13770-17818 Capsella grandiflora
Cagra.14151s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold14151: 15819-17818 Capsella grandiflora
Cagra.14151s0005 2.0kb downstream 2.0kb downstream 4049 true Scaffold14151: 11770-15818 Capsella grandiflora
Cagra.14151s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold14151: 11770-13769 Capsella grandiflora
Cagra.14151s0005 5.0kb upstream 5.0kb upstream 4608 true Scaffold14151: 13770-18377 Capsella grandiflora
Cagra.14151s0005 5.0kb upstream 5.0kb upstream 2559 false Scaffold14151: 15819-18377 Capsella grandiflora
Cagra.14151s0005 5.0kb downstream 5.0kb downstream 7049 true Scaffold14151: 8770-15818 Capsella grandiflora
Cagra.14151s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold14151: 8770-13769 Capsella grandiflora
Cagra.14151s0005 10.0kb upstream 10.0kb upstream 4608 true Scaffold14151: 13770-18377 Capsella grandiflora
Cagra.14151s0005 10.0kb upstream 10.0kb upstream 2559 false Scaffold14151: 15819-18377 Capsella grandiflora
Cagra.14151s0005 10.0kb downstream 10.0kb downstream 12049 true Scaffold14151: 3770-15818 Capsella grandiflora
Cagra.14151s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold14151: 3770-13769 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369634 5261 Brassicaceae View MSA
123832416 5264 Brassicales-Malvales View MSA
124350381 5266 SBM View MSA
124247963 5268 Malvidae View MSA
124074135 5270 Rosid View MSA
123737772 5271 Pentapetalae View MSA
122793986 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain