Gene : Gorai.004G052500 G. raimondii v2.1
Defline:  (1 of 1) KOG3428//KOG3448//KOG3482 - Small nuclear ribonucleoprotein SMD1 and related snRNPs // Predicted snRNP core protein // Small nuclear ribonucleoprotein (snRNP) SMF Genomic Order:  525
Name:  ? Gorai.004G052500 Secondary Identifier:  ? PAC:26774092
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G052500 0.5kb upstream 0.5kb upstream 3435 true Chr04: 4812215-4815649 Gossypium raimondii
Gorai.004G052500 0.5kb upstream 0.5kb upstream 500 false Chr04: 4815150-4815649 Gossypium raimondii
Gorai.004G052500 0.5kb downstream 0.5kb downstream 3435 true Chr04: 4811715-4815149 Gossypium raimondii
Gorai.004G052500 0.5kb downstream 0.5kb downstream 500 false Chr04: 4811715-4812214 Gossypium raimondii
Gorai.004G052500 1.0kb upstream 1.0kb upstream 3935 true Chr04: 4812215-4816149 Gossypium raimondii
Gorai.004G052500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4815150-4816149 Gossypium raimondii
Gorai.004G052500 1.0kb downstream 1.0kb downstream 3935 true Chr04: 4811215-4815149 Gossypium raimondii
Gorai.004G052500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4811215-4812214 Gossypium raimondii
Gorai.004G052500 2.0kb upstream 2.0kb upstream 4935 true Chr04: 4812215-4817149 Gossypium raimondii
Gorai.004G052500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4815150-4817149 Gossypium raimondii
Gorai.004G052500 2.0kb downstream 2.0kb downstream 4935 true Chr04: 4810215-4815149 Gossypium raimondii
Gorai.004G052500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4810215-4812214 Gossypium raimondii
Gorai.004G052500 5.0kb upstream 5.0kb upstream 7935 true Chr04: 4812215-4820149 Gossypium raimondii
Gorai.004G052500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4815150-4820149 Gossypium raimondii
Gorai.004G052500 5.0kb downstream 5.0kb downstream 7935 true Chr04: 4807215-4815149 Gossypium raimondii
Gorai.004G052500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4807215-4812214 Gossypium raimondii
Gorai.004G052500 10.0kb upstream 10.0kb upstream 12935 true Chr04: 4812215-4825149 Gossypium raimondii
Gorai.004G052500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4815150-4825149 Gossypium raimondii
Gorai.004G052500 10.0kb downstream 10.0kb downstream 12935 true Chr04: 4802215-4815149 Gossypium raimondii
Gorai.004G052500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4802215-4812214 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832416 5264 Brassicales-Malvales View MSA
124350381 5266 SBM View MSA
124247963 5268 Malvidae View MSA
124074135 5270 Rosid View MSA
123737772 5271 Pentapetalae View MSA
122793986 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain