Gene : Eucgr.K03467 E. grandis v2.0
Defline:  (1 of 1) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM Genomic Order:  2901
Name:  ? Eucgr.K03467 Secondary Identifier:  ? PAC:32066584
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03467 0.5kb upstream 0.5kb upstream 3531 true Chr11: 43091477-43095007 Eucalyptus grandis
Eucgr.K03467 0.5kb upstream 0.5kb upstream 500 false Chr11: 43091477-43091976 Eucalyptus grandis
Eucgr.K03467 0.5kb downstream 0.5kb downstream 3531 true Chr11: 43091977-43095507 Eucalyptus grandis
Eucgr.K03467 0.5kb downstream 0.5kb downstream 500 false Chr11: 43095008-43095507 Eucalyptus grandis
Eucgr.K03467 1.0kb upstream 1.0kb upstream 4031 true Chr11: 43090977-43095007 Eucalyptus grandis
Eucgr.K03467 1.0kb upstream 1.0kb upstream 1000 false Chr11: 43090977-43091976 Eucalyptus grandis
Eucgr.K03467 1.0kb downstream 1.0kb downstream 4031 true Chr11: 43091977-43096007 Eucalyptus grandis
Eucgr.K03467 1.0kb downstream 1.0kb downstream 1000 false Chr11: 43095008-43096007 Eucalyptus grandis
Eucgr.K03467 2.0kb upstream 2.0kb upstream 5031 true Chr11: 43089977-43095007 Eucalyptus grandis
Eucgr.K03467 2.0kb upstream 2.0kb upstream 2000 false Chr11: 43089977-43091976 Eucalyptus grandis
Eucgr.K03467 2.0kb downstream 2.0kb downstream 5031 true Chr11: 43091977-43097007 Eucalyptus grandis
Eucgr.K03467 2.0kb downstream 2.0kb downstream 2000 false Chr11: 43095008-43097007 Eucalyptus grandis
Eucgr.K03467 5.0kb upstream 5.0kb upstream 8031 true Chr11: 43086977-43095007 Eucalyptus grandis
Eucgr.K03467 5.0kb upstream 5.0kb upstream 5000 false Chr11: 43086977-43091976 Eucalyptus grandis
Eucgr.K03467 5.0kb downstream 5.0kb downstream 8031 true Chr11: 43091977-43100007 Eucalyptus grandis
Eucgr.K03467 5.0kb downstream 5.0kb downstream 5000 false Chr11: 43095008-43100007 Eucalyptus grandis
Eucgr.K03467 10.0kb upstream 10.0kb upstream 13031 true Chr11: 43081977-43095007 Eucalyptus grandis
Eucgr.K03467 10.0kb upstream 10.0kb upstream 10000 false Chr11: 43081977-43091976 Eucalyptus grandis
Eucgr.K03467 10.0kb downstream 10.0kb downstream 13031 true Chr11: 43091977-43105007 Eucalyptus grandis
Eucgr.K03467 10.0kb downstream 10.0kb downstream 10000 false Chr11: 43095008-43105007 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074135 5270 Rosid View MSA
123737772 5271 Pentapetalae View MSA
122793986 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.9741 0.0 85.4799 High  
cufflinks 49.0052 0.0 125.805 High  
cufflinks 31.2617 0.0 82.246 High Low
cufflinks 66.1448 0.0 168.863 High  
cufflinks 77.9019 0.0 200.101 High High
cufflinks 34.6667 0.0 93.6263 High  

0 Strain