Gene : Medtr8g058537 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM Description:  u6 snRNA-associated-like-Smprotein
Genomic Order:  2508 Name:  ? Medtr8g058537
Secondary Identifier:  ? PAC:31072710
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g058537 0.5kb upstream 0.5kb upstream 2346   true chr8: 20158080-20160425 Medicago truncatula
Medtr8g058537 0.5kb upstream 0.5kb upstream 500   false chr8: 20159926-20160425 Medicago truncatula
Medtr8g058537 0.5kb downstream 0.5kb downstream 2346   true chr8: 20157580-20159925 Medicago truncatula
Medtr8g058537 0.5kb downstream 0.5kb downstream 500   false chr8: 20157580-20158079 Medicago truncatula
Medtr8g058537 1.0kb upstream 1.0kb upstream 2846   true chr8: 20158080-20160925 Medicago truncatula
Medtr8g058537 1.0kb upstream 1.0kb upstream 1000   false chr8: 20159926-20160925 Medicago truncatula
Medtr8g058537 1.0kb downstream 1.0kb downstream 2846   true chr8: 20157080-20159925 Medicago truncatula
Medtr8g058537 1.0kb downstream 1.0kb downstream 1000   false chr8: 20157080-20158079 Medicago truncatula
Medtr8g058537 2.0kb upstream 2.0kb upstream 3846   true chr8: 20158080-20161925 Medicago truncatula
Medtr8g058537 2.0kb upstream 2.0kb upstream 2000   false chr8: 20159926-20161925 Medicago truncatula
Medtr8g058537 2.0kb downstream 2.0kb downstream 3846   true chr8: 20156080-20159925 Medicago truncatula
Medtr8g058537 2.0kb downstream 2.0kb downstream 2000   false chr8: 20156080-20158079 Medicago truncatula
Medtr8g058537 5.0kb upstream 5.0kb upstream 6846   true chr8: 20158080-20164925 Medicago truncatula
Medtr8g058537 5.0kb upstream 5.0kb upstream 5000   false chr8: 20159926-20164925 Medicago truncatula
Medtr8g058537 5.0kb downstream 5.0kb downstream 6846   true chr8: 20153080-20159925 Medicago truncatula
Medtr8g058537 5.0kb downstream 5.0kb downstream 5000   false chr8: 20153080-20158079 Medicago truncatula
Medtr8g058537 10.0kb upstream 10.0kb upstream 11846   true chr8: 20158080-20169925 Medicago truncatula
Medtr8g058537 10.0kb upstream 10.0kb upstream 10000   false chr8: 20159926-20169925 Medicago truncatula
Medtr8g058537 10.0kb downstream 10.0kb downstream 11846   true chr8: 20148080-20159925 Medicago truncatula
Medtr8g058537 10.0kb downstream 10.0kb downstream 10000   false chr8: 20148080-20158079 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309852 5265 Fabidae View MSA
124074135 5270 Rosid View MSA
123737772 5271 Pentapetalae View MSA
122793986 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.065        
cufflinks 0.069        
cufflinks 0.016     Low Low
cufflinks 0.217       High
cufflinks 0.026     Low  
cufflinks 0.232       High
cufflinks 0.014     Low Low
cufflinks 0.043     Low  
cufflinks 0.097        

0 Strain