Gene : Cucsa.079530 C. sativus v1.0
Defline:  (1 of 2) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM Genomic Order:  165
Name:  ? Cucsa.079530 Secondary Identifier:  ? PAC:16956227
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.079530 0.5kb upstream 0.5kb upstream 5471 true scaffold00793: 2378316-2383786 Cucumis sativus
Cucsa.079530 0.5kb upstream 0.5kb upstream 500 false scaffold00793: 2378316-2378815 Cucumis sativus
Cucsa.079530 0.5kb downstream 0.5kb downstream 5471 true scaffold00793: 2378816-2384286 Cucumis sativus
Cucsa.079530 0.5kb downstream 0.5kb downstream 500 false scaffold00793: 2383787-2384286 Cucumis sativus
Cucsa.079530 1.0kb upstream 1.0kb upstream 5971 true scaffold00793: 2377816-2383786 Cucumis sativus
Cucsa.079530 1.0kb upstream 1.0kb upstream 1000 false scaffold00793: 2377816-2378815 Cucumis sativus
Cucsa.079530 1.0kb downstream 1.0kb downstream 5971 true scaffold00793: 2378816-2384786 Cucumis sativus
Cucsa.079530 1.0kb downstream 1.0kb downstream 1000 false scaffold00793: 2383787-2384786 Cucumis sativus
Cucsa.079530 2.0kb upstream 2.0kb upstream 6971 true scaffold00793: 2376816-2383786 Cucumis sativus
Cucsa.079530 2.0kb upstream 2.0kb upstream 2000 false scaffold00793: 2376816-2378815 Cucumis sativus
Cucsa.079530 2.0kb downstream 2.0kb downstream 6971 true scaffold00793: 2378816-2385786 Cucumis sativus
Cucsa.079530 2.0kb downstream 2.0kb downstream 2000 false scaffold00793: 2383787-2385786 Cucumis sativus
Cucsa.079530 5.0kb upstream 5.0kb upstream 9971 true scaffold00793: 2373816-2383786 Cucumis sativus
Cucsa.079530 5.0kb upstream 5.0kb upstream 5000 false scaffold00793: 2373816-2378815 Cucumis sativus
Cucsa.079530 5.0kb downstream 5.0kb downstream 9971 true scaffold00793: 2378816-2388786 Cucumis sativus
Cucsa.079530 5.0kb downstream 5.0kb downstream 5000 false scaffold00793: 2383787-2388786 Cucumis sativus
Cucsa.079530 10.0kb upstream 10.0kb upstream 14971 true scaffold00793: 2368816-2383786 Cucumis sativus
Cucsa.079530 10.0kb upstream 10.0kb upstream 10000 false scaffold00793: 2368816-2378815 Cucumis sativus
Cucsa.079530 10.0kb downstream 10.0kb downstream 14971 true scaffold00793: 2378816-2393786 Cucumis sativus
Cucsa.079530 10.0kb downstream 10.0kb downstream 10000 false scaffold00793: 2383787-2393786 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309852 5265 Fabidae View MSA
124074135 5270 Rosid View MSA
123737772 5271 Pentapetalae View MSA
122793986 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain