Gene : Glyma.02G155300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM Genomic Order:  1553
Name:  ? Glyma.02G155300 Secondary Identifier:  ? PAC:30507592
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G155300 0.5kb upstream 0.5kb upstream 3210 true Chr02: 15910753-15913962 Glycine max
Glyma.02G155300 0.5kb upstream 0.5kb upstream 500 false Chr02: 15910753-15911252 Glycine max
Glyma.02G155300 0.5kb downstream 0.5kb downstream 3210 true Chr02: 15911253-15914462 Glycine max
Glyma.02G155300 0.5kb downstream 0.5kb downstream 500 false Chr02: 15913963-15914462 Glycine max
Glyma.02G155300 1.0kb upstream 1.0kb upstream 3710 true Chr02: 15910253-15913962 Glycine max
Glyma.02G155300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15910253-15911252 Glycine max
Glyma.02G155300 1.0kb downstream 1.0kb downstream 3710 true Chr02: 15911253-15914962 Glycine max
Glyma.02G155300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15913963-15914962 Glycine max
Glyma.02G155300 2.0kb upstream 2.0kb upstream 4710 true Chr02: 15909253-15913962 Glycine max
Glyma.02G155300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15909253-15911252 Glycine max
Glyma.02G155300 2.0kb downstream 2.0kb downstream 4710 true Chr02: 15911253-15915962 Glycine max
Glyma.02G155300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15913963-15915962 Glycine max
Glyma.02G155300 5.0kb upstream 5.0kb upstream 7710 true Chr02: 15906253-15913962 Glycine max
Glyma.02G155300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15906253-15911252 Glycine max
Glyma.02G155300 5.0kb downstream 5.0kb downstream 7710 true Chr02: 15911253-15918962 Glycine max
Glyma.02G155300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15913963-15918962 Glycine max
Glyma.02G155300 10.0kb upstream 10.0kb upstream 12710 true Chr02: 15901253-15913962 Glycine max
Glyma.02G155300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15901253-15911252 Glycine max
Glyma.02G155300 10.0kb downstream 10.0kb downstream 12710 true Chr02: 15911253-15923962 Glycine max
Glyma.02G155300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15913963-15923962 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309852 5265 Fabidae View MSA
124074135 5270 Rosid View MSA
123737772 5271 Pentapetalae View MSA
122793986 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8239 0.0 44.4136    
cufflinks 13.6643 0.0 50.1373    
cufflinks 7.779 0.0 27.9932   Low
cufflinks 9.34283 0.0 32.0668   Low
cufflinks 19.7409 0.0 68.6809   High
cufflinks 23.2759 0.0 80.0452 High High
cufflinks 12.144 0.0 39.1891    
cufflinks 17.676 0.0 62.2796    
cufflinks 13.5156 0.0 43.0275    
cufflinks 2.834        
cufflinks 1.983       Low
cufflinks 2.09        
cufflinks 4.426       High
cufflinks 5.279       High
cufflinks 1.425       Low
cufflinks 3.239        
cufflinks 2.441        
cufflinks 2.563        
cufflinks 3.079        
cufflinks 2.442        
cufflinks 2.51        
cufflinks 2.695        
cufflinks 3.173        
cufflinks 2.742        
cufflinks 2.767        
cufflinks 2.571        

0 Strain