Gene : Medtr8g058420 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM Description:  u6 snRNA-associated-like-Smprotein
Genomic Order:  2513 Name:  ? Medtr8g058420
Secondary Identifier:  ? PAC:31072290
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g058420 0.5kb upstream 0.5kb upstream 2386   true chr8: 20197005-20199390 Medicago truncatula
Medtr8g058420 0.5kb upstream 0.5kb upstream 500   false chr8: 20197005-20197504 Medicago truncatula
Medtr8g058420 0.5kb downstream 0.5kb downstream 2386   true chr8: 20197505-20199890 Medicago truncatula
Medtr8g058420 0.5kb downstream 0.5kb downstream 500   false chr8: 20199391-20199890 Medicago truncatula
Medtr8g058420 1.0kb upstream 1.0kb upstream 2886   true chr8: 20196505-20199390 Medicago truncatula
Medtr8g058420 1.0kb upstream 1.0kb upstream 1000   false chr8: 20196505-20197504 Medicago truncatula
Medtr8g058420 1.0kb downstream 1.0kb downstream 2886   true chr8: 20197505-20200390 Medicago truncatula
Medtr8g058420 1.0kb downstream 1.0kb downstream 1000   false chr8: 20199391-20200390 Medicago truncatula
Medtr8g058420 2.0kb upstream 2.0kb upstream 3886   true chr8: 20195505-20199390 Medicago truncatula
Medtr8g058420 2.0kb upstream 2.0kb upstream 2000   false chr8: 20195505-20197504 Medicago truncatula
Medtr8g058420 2.0kb downstream 2.0kb downstream 3886   true chr8: 20197505-20201390 Medicago truncatula
Medtr8g058420 2.0kb downstream 2.0kb downstream 2000   false chr8: 20199391-20201390 Medicago truncatula
Medtr8g058420 5.0kb upstream 5.0kb upstream 6886   true chr8: 20192505-20199390 Medicago truncatula
Medtr8g058420 5.0kb upstream 5.0kb upstream 5000   false chr8: 20192505-20197504 Medicago truncatula
Medtr8g058420 5.0kb downstream 5.0kb downstream 6886   true chr8: 20197505-20204390 Medicago truncatula
Medtr8g058420 5.0kb downstream 5.0kb downstream 5000   false chr8: 20199391-20204390 Medicago truncatula
Medtr8g058420 10.0kb upstream 10.0kb upstream 11886   true chr8: 20187505-20199390 Medicago truncatula
Medtr8g058420 10.0kb upstream 10.0kb upstream 10000   false chr8: 20187505-20197504 Medicago truncatula
Medtr8g058420 10.0kb downstream 10.0kb downstream 11886   true chr8: 20197505-20209390 Medicago truncatula
Medtr8g058420 10.0kb downstream 10.0kb downstream 10000   false chr8: 20199391-20209390 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309852 5265 Fabidae View MSA
124074135 5270 Rosid View MSA
123737772 5271 Pentapetalae View MSA
122793986 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low High
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain