Gene : Medtr8g091620 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM Description:  u6 snRNA-associated-like-Smprotein
Genomic Order:  4767 Name:  ? Medtr8g091620
Secondary Identifier:  ? PAC:31076598
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g091620 0.5kb upstream 0.5kb upstream 3768   true chr8: 38226145-38229912 Medicago truncatula
Medtr8g091620 0.5kb upstream 0.5kb upstream 500   false chr8: 38229413-38229912 Medicago truncatula
Medtr8g091620 0.5kb downstream 0.5kb downstream 3768   true chr8: 38225645-38229412 Medicago truncatula
Medtr8g091620 0.5kb downstream 0.5kb downstream 500   false chr8: 38225645-38226144 Medicago truncatula
Medtr8g091620 1.0kb upstream 1.0kb upstream 4268   true chr8: 38226145-38230412 Medicago truncatula
Medtr8g091620 1.0kb upstream 1.0kb upstream 1000   false chr8: 38229413-38230412 Medicago truncatula
Medtr8g091620 1.0kb downstream 1.0kb downstream 4268   true chr8: 38225145-38229412 Medicago truncatula
Medtr8g091620 1.0kb downstream 1.0kb downstream 1000   false chr8: 38225145-38226144 Medicago truncatula
Medtr8g091620 2.0kb upstream 2.0kb upstream 5268   true chr8: 38226145-38231412 Medicago truncatula
Medtr8g091620 2.0kb upstream 2.0kb upstream 2000   false chr8: 38229413-38231412 Medicago truncatula
Medtr8g091620 2.0kb downstream 2.0kb downstream 5268   true chr8: 38224145-38229412 Medicago truncatula
Medtr8g091620 2.0kb downstream 2.0kb downstream 2000   false chr8: 38224145-38226144 Medicago truncatula
Medtr8g091620 5.0kb upstream 5.0kb upstream 8268   true chr8: 38226145-38234412 Medicago truncatula
Medtr8g091620 5.0kb upstream 5.0kb upstream 5000   false chr8: 38229413-38234412 Medicago truncatula
Medtr8g091620 5.0kb downstream 5.0kb downstream 8268   true chr8: 38221145-38229412 Medicago truncatula
Medtr8g091620 5.0kb downstream 5.0kb downstream 5000   false chr8: 38221145-38226144 Medicago truncatula
Medtr8g091620 10.0kb upstream 10.0kb upstream 13268   true chr8: 38226145-38239412 Medicago truncatula
Medtr8g091620 10.0kb upstream 10.0kb upstream 10000   false chr8: 38229413-38239412 Medicago truncatula
Medtr8g091620 10.0kb downstream 10.0kb downstream 13268   true chr8: 38216145-38229412 Medicago truncatula
Medtr8g091620 10.0kb downstream 10.0kb downstream 10000   false chr8: 38216145-38226144 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309852 5265 Fabidae View MSA
124074135 5270 Rosid View MSA
123737772 5271 Pentapetalae View MSA
122793986 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.267        
cufflinks 3.216        
cufflinks 5.186        
cufflinks 6.448       High
cufflinks 4.142        
cufflinks 4.451        
cufflinks 2.747       Low
cufflinks 3.666        
cufflinks 3.707        

0 Strain