Gene : Glyma.10G020100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11064:SF42 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5 Genomic Order:  201
Name:  ? Glyma.10G020100 Secondary Identifier:  ? PAC:30473808
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G020100 0.5kb upstream 0.5kb upstream 1286 true Chr10: 1750132-1751417 Glycine max
Glyma.10G020100 0.5kb upstream 0.5kb upstream 500 false Chr10: 1750918-1751417 Glycine max
Glyma.10G020100 0.5kb downstream 0.5kb downstream 1286 true Chr10: 1749632-1750917 Glycine max
Glyma.10G020100 0.5kb downstream 0.5kb downstream 500 false Chr10: 1749632-1750131 Glycine max
Glyma.10G020100 1.0kb upstream 1.0kb upstream 1786 true Chr10: 1750132-1751917 Glycine max
Glyma.10G020100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1750918-1751917 Glycine max
Glyma.10G020100 1.0kb downstream 1.0kb downstream 1786 true Chr10: 1749132-1750917 Glycine max
Glyma.10G020100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1749132-1750131 Glycine max
Glyma.10G020100 2.0kb upstream 2.0kb upstream 2786 true Chr10: 1750132-1752917 Glycine max
Glyma.10G020100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1750918-1752917 Glycine max
Glyma.10G020100 2.0kb downstream 2.0kb downstream 2786 true Chr10: 1748132-1750917 Glycine max
Glyma.10G020100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1748132-1750131 Glycine max
Glyma.10G020100 5.0kb upstream 5.0kb upstream 5786 true Chr10: 1750132-1755917 Glycine max
Glyma.10G020100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1750918-1755917 Glycine max
Glyma.10G020100 5.0kb downstream 5.0kb downstream 5786 true Chr10: 1745132-1750917 Glycine max
Glyma.10G020100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1745132-1750131 Glycine max
Glyma.10G020100 10.0kb upstream 10.0kb upstream 10786 true Chr10: 1750132-1760917 Glycine max
Glyma.10G020100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1750918-1760917 Glycine max
Glyma.10G020100 10.0kb downstream 10.0kb downstream 10786 true Chr10: 1740132-1750917 Glycine max
Glyma.10G020100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1740132-1750131 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041139 5273 Angiosperm View MSA
122312390 5265 Fabidae View MSA
124070521 5270 Rosid View MSA
123747842 5271 Pentapetalae View MSA
122796503 5272 Eudicot View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0385765 0.0 0.170752 Low Low
cufflinks 0.0344839 0.0 0.154737 Low Low
cufflinks 0.82781 0.0 3.12817    
cufflinks 0.181329 0.0 0.727938 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.189316 0.0 0.75813 Low  
cufflinks 2.18134 0.0 7.81722   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.098        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.091       High
cufflinks 0.171        
cufflinks 0.967       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.706        
cufflinks 0.019     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.138        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.122        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.35        

0 Strain