Gene : Glyma.10G018000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11878 - SODIUM/CALCIUM EXCHANGER Genomic Order:  180
Name:  ? Glyma.10G018000 Secondary Identifier:  ? PAC:30475647
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G018000 0.5kb upstream 0.5kb upstream 6366 true Chr10: 1576349-1582714 Glycine max
Glyma.10G018000 0.5kb upstream 0.5kb upstream 500 false Chr10: 1582215-1582714 Glycine max
Glyma.10G018000 0.5kb downstream 0.5kb downstream 6366 true Chr10: 1575849-1582214 Glycine max
Glyma.10G018000 0.5kb downstream 0.5kb downstream 500 false Chr10: 1575849-1576348 Glycine max
Glyma.10G018000 1.0kb upstream 1.0kb upstream 6866 true Chr10: 1576349-1583214 Glycine max
Glyma.10G018000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1582215-1583214 Glycine max
Glyma.10G018000 1.0kb downstream 1.0kb downstream 6866 true Chr10: 1575349-1582214 Glycine max
Glyma.10G018000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1575349-1576348 Glycine max
Glyma.10G018000 2.0kb upstream 2.0kb upstream 7866 true Chr10: 1576349-1584214 Glycine max
Glyma.10G018000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1582215-1584214 Glycine max
Glyma.10G018000 2.0kb downstream 2.0kb downstream 7866 true Chr10: 1574349-1582214 Glycine max
Glyma.10G018000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1574349-1576348 Glycine max
Glyma.10G018000 5.0kb upstream 5.0kb upstream 10866 true Chr10: 1576349-1587214 Glycine max
Glyma.10G018000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1582215-1587214 Glycine max
Glyma.10G018000 5.0kb downstream 5.0kb downstream 10866 true Chr10: 1571349-1582214 Glycine max
Glyma.10G018000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1571349-1576348 Glycine max
Glyma.10G018000 10.0kb upstream 10.0kb upstream 15866 true Chr10: 1576349-1592214 Glycine max
Glyma.10G018000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1582215-1592214 Glycine max
Glyma.10G018000 10.0kb downstream 10.0kb downstream 15866 true Chr10: 1566349-1582214 Glycine max
Glyma.10G018000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1566349-1576348 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026222 5273 Angiosperm View MSA
122302932 5265 Fabidae View MSA
124062235 5270 Rosid View MSA
123741158 5271 Pentapetalae View MSA
122792676 5272 Eudicot View MSA
121347754 5274 Embryophyte View MSA
123427764 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.09338 0.0 9.56831    
cufflinks 0.950891 0.0 5.49752   Low
cufflinks 2.78617 0.0 11.4005    
cufflinks 1.85681 0.0 9.09942    
cufflinks 6.33169 0.0 24.0345    
cufflinks 32.6726 0.0 119.216 High High
cufflinks 0.72588 0.0 3.19077   Low
cufflinks 2.56477 0.0 8.42951    
cufflinks 9.50392 0.0 33.7637    
cufflinks 0.739        
cufflinks 0.546        
cufflinks 1.199        
cufflinks 1.313        
cufflinks 0.679        
cufflinks 6.431     High High
cufflinks 0.193       Low
cufflinks 5.028       High
cufflinks 1.542        
cufflinks 0.947        
cufflinks 0.263       Low
cufflinks 1.074        
cufflinks 0.325        
cufflinks 1.559        
cufflinks 0.626        
cufflinks 0.183       Low
cufflinks 1.71        

0 Strain