Gene : Glyma.10G007800 G. max Wm82.a2.v1
Defline:  (1 of 9) PF05514 - HR-like lesion-inducing (HR_lesion) Genomic Order:  78
Name:  ? Glyma.10G007800 Secondary Identifier:  ? PAC:30474764
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G007800 0.5kb upstream 0.5kb upstream 3007 true Chr10: 747988-750994 Glycine max
Glyma.10G007800 0.5kb upstream 0.5kb upstream 500 false Chr10: 747988-748487 Glycine max
Glyma.10G007800 0.5kb downstream 0.5kb downstream 3007 true Chr10: 748488-751494 Glycine max
Glyma.10G007800 0.5kb downstream 0.5kb downstream 500 false Chr10: 750995-751494 Glycine max
Glyma.10G007800 1.0kb upstream 1.0kb upstream 3507 true Chr10: 747488-750994 Glycine max
Glyma.10G007800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 747488-748487 Glycine max
Glyma.10G007800 1.0kb downstream 1.0kb downstream 3507 true Chr10: 748488-751994 Glycine max
Glyma.10G007800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 750995-751994 Glycine max
Glyma.10G007800 2.0kb upstream 2.0kb upstream 4507 true Chr10: 746488-750994 Glycine max
Glyma.10G007800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 746488-748487 Glycine max
Glyma.10G007800 2.0kb downstream 2.0kb downstream 4507 true Chr10: 748488-752994 Glycine max
Glyma.10G007800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 750995-752994 Glycine max
Glyma.10G007800 5.0kb upstream 5.0kb upstream 7507 true Chr10: 743488-750994 Glycine max
Glyma.10G007800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 743488-748487 Glycine max
Glyma.10G007800 5.0kb downstream 5.0kb downstream 7507 true Chr10: 748488-755994 Glycine max
Glyma.10G007800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 750995-755994 Glycine max
Glyma.10G007800 10.0kb upstream 10.0kb upstream 12507 true Chr10: 738488-750994 Glycine max
Glyma.10G007800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 738488-748487 Glycine max
Glyma.10G007800 10.0kb downstream 10.0kb downstream 12507 true Chr10: 748488-760994 Glycine max
Glyma.10G007800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 750995-760994 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306907 5265 Fabidae View MSA
124068241 5270 Rosid View MSA
123750516 5271 Pentapetalae View MSA
122797406 5272 Eudicot View MSA
122050658 5273 Angiosperm View MSA
121351347 5274 Embryophyte View MSA
123426506 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.666 0.0 91.6513   Low
cufflinks 73.5423 0.0 345.016 High  
cufflinks 69.1235 0.0 315.121 High  
cufflinks 63.432 0.0 307.455 High  
cufflinks 154.336 0.0 833.844 High  
cufflinks 115.816 0.0 591.051 High  
cufflinks 166.616 0.0 969.451 High High
cufflinks 73.7753 0.0 350.493 High  
cufflinks 120.817 0.0 632.301 High  
cufflinks 17.103     High  
cufflinks 11.035     High  
cufflinks 11.678     High  
cufflinks 31.883     High High
cufflinks 44.153     High High
cufflinks 9.448     High  
cufflinks 8.082     High  
cufflinks 11.841     High  
cufflinks 14.317     High  
cufflinks 14.698     High  
cufflinks 6.881     High Low
cufflinks 10.334     High  
cufflinks 7.616     High Low
cufflinks 10.24     High  
cufflinks 13.127     High  
cufflinks 7.648     High  
cufflinks 12.484     High  

0 Strain