Gene : Glyma.10G029300 G. max Wm82.a2.v1
Defline:  (1 of 16) PF05703 - Auxin canalisation (Auxin_canalis) Genomic Order:  293
Name:  ? Glyma.10G029300 Secondary Identifier:  ? PAC:30474435
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G029300 0.5kb upstream 0.5kb upstream 4966 true Chr10: 2553701-2558666 Glycine max
Glyma.10G029300 0.5kb upstream 0.5kb upstream 500 false Chr10: 2553701-2554200 Glycine max
Glyma.10G029300 0.5kb downstream 0.5kb downstream 4966 true Chr10: 2554201-2559166 Glycine max
Glyma.10G029300 0.5kb downstream 0.5kb downstream 500 false Chr10: 2558667-2559166 Glycine max
Glyma.10G029300 1.0kb upstream 1.0kb upstream 5466 true Chr10: 2553201-2558666 Glycine max
Glyma.10G029300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2553201-2554200 Glycine max
Glyma.10G029300 1.0kb downstream 1.0kb downstream 5466 true Chr10: 2554201-2559666 Glycine max
Glyma.10G029300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2558667-2559666 Glycine max
Glyma.10G029300 2.0kb upstream 2.0kb upstream 6466 true Chr10: 2552201-2558666 Glycine max
Glyma.10G029300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2552201-2554200 Glycine max
Glyma.10G029300 2.0kb downstream 2.0kb downstream 6466 true Chr10: 2554201-2560666 Glycine max
Glyma.10G029300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2558667-2560666 Glycine max
Glyma.10G029300 5.0kb upstream 5.0kb upstream 9466 true Chr10: 2549201-2558666 Glycine max
Glyma.10G029300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2549201-2554200 Glycine max
Glyma.10G029300 5.0kb downstream 5.0kb downstream 9466 true Chr10: 2554201-2563666 Glycine max
Glyma.10G029300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2558667-2563666 Glycine max
Glyma.10G029300 10.0kb upstream 10.0kb upstream 14466 true Chr10: 2544201-2558666 Glycine max
Glyma.10G029300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2544201-2554200 Glycine max
Glyma.10G029300 10.0kb downstream 10.0kb downstream 14466 true Chr10: 2554201-2568666 Glycine max
Glyma.10G029300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2558667-2568666 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307435 5265 Fabidae View MSA
124061946 5270 Rosid View MSA
123746535 5271 Pentapetalae View MSA
122785782 5272 Eudicot View MSA
122047623 5273 Angiosperm View MSA
121348921 5274 Embryophyte View MSA
123381080 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.45652 0.0 10.4118   High
cufflinks 0.376753 0.0 1.40504    
cufflinks 0.135547 0.0 0.529021 Low  
cufflinks 0.028704 0.0 0.120122 Low Low
cufflinks 0.126586 0.0 0.495451 Low  
cufflinks 0.509481 0.0 1.87238    
cufflinks 0.043717 0.0 0.178166 Low Low
cufflinks 0.278794 0.0 1.05439    
cufflinks 0.007     Low Low
cufflinks 0.013     Low  
cufflinks 0.508        
cufflinks 0.011     Low  
cufflinks 0.014     Low  
cufflinks 0.026     Low  
cufflinks 0.739        
cufflinks 0.007     Low Low
cufflinks 0.5        
cufflinks 1.362       High
cufflinks 1.143       High
cufflinks 0.009     Low  
cufflinks 1.139       High
cufflinks 0.834       High
cufflinks 0.004     Low Low
cufflinks 0.652        
cufflinks 0.012     Low  

0 Strain