Gene : Glyma.10G031900 G. max Wm82.a2.v1

Defline:  (1 of 98) PF02309 - AUX/IAA family (AUX_IAA) Genomic Order:  319
Name:  ? Glyma.10G031900 Secondary Identifier:  ? PAC:30473819

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G031900 0.5kb upstream 0.5kb upstream 3658 true Chr10: 2784476-2788133 Glycine max
Glyma.10G031900 0.5kb upstream 0.5kb upstream 500 false Chr10: 2784476-2784975 Glycine max
Glyma.10G031900 0.5kb downstream 0.5kb downstream 3658 true Chr10: 2784976-2788633 Glycine max
Glyma.10G031900 0.5kb downstream 0.5kb downstream 500 false Chr10: 2788134-2788633 Glycine max
Glyma.10G031900 1.0kb upstream 1.0kb upstream 4158 true Chr10: 2783976-2788133 Glycine max
Glyma.10G031900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2783976-2784975 Glycine max
Glyma.10G031900 1.0kb downstream 1.0kb downstream 4158 true Chr10: 2784976-2789133 Glycine max
Glyma.10G031900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2788134-2789133 Glycine max
Glyma.10G031900 2.0kb upstream 2.0kb upstream 5158 true Chr10: 2782976-2788133 Glycine max
Glyma.10G031900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2782976-2784975 Glycine max
Glyma.10G031900 2.0kb downstream 2.0kb downstream 5158 true Chr10: 2784976-2790133 Glycine max
Glyma.10G031900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2788134-2790133 Glycine max
Glyma.10G031900 5.0kb upstream 5.0kb upstream 8158 true Chr10: 2779976-2788133 Glycine max
Glyma.10G031900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2779976-2784975 Glycine max
Glyma.10G031900 5.0kb downstream 5.0kb downstream 8158 true Chr10: 2784976-2793133 Glycine max
Glyma.10G031900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2788134-2793133 Glycine max
Glyma.10G031900 10.0kb upstream 10.0kb upstream 13158 true Chr10: 2774976-2788133 Glycine max
Glyma.10G031900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2774976-2784975 Glycine max
Glyma.10G031900 10.0kb downstream 10.0kb downstream 13158 true Chr10: 2784976-2798133 Glycine max
Glyma.10G031900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2788134-2798133 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309367 5265 Fabidae View MSA
124071523 5270 Rosid View MSA
123744630 5271 Pentapetalae View MSA
122796049 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.0775 0.0 69.6527    
cufflinks 23.3668 0.0 80.9765 High  
cufflinks 152.36 0.0 726.079 High High
cufflinks 181.773 0.0 943.74 High High
cufflinks 46.2699 0.0 171.722 High  
cufflinks 58.6722 0.0 229.639 High  
cufflinks 0.793772 0.0 5.11349   Low
cufflinks 20.1932 0.0 70.43    
cufflinks 12.7275 0.0 45.7107    
cufflinks 23.971     High  
cufflinks 0.774        
cufflinks 23.092     High  
cufflinks 12.976     High  
cufflinks 16.856     High  
cufflinks 0.027     Low Low
cufflinks 15.566     High  
cufflinks 1.121        
cufflinks 32.228     High High
cufflinks 11.303     High  
cufflinks 9.364     High  
cufflinks 1.486        
cufflinks 11.042     High  
cufflinks 6.186        
cufflinks 0.614       Low
cufflinks 14.13     High  
cufflinks 2.678        

0 Strain