Gene : Glyma.10G078200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12081//PTHR12081:SF47 - TRANSCRIPTION FACTOR E2F Genomic Order:  782
Name:  ? Glyma.10G078200 Secondary Identifier:  ? PAC:30477564
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G078200 0.5kb upstream 0.5kb upstream 5575 true Chr10: 8744685-8750259 Glycine max
Glyma.10G078200 0.5kb upstream 0.5kb upstream 500 false Chr10: 8749760-8750259 Glycine max
Glyma.10G078200 0.5kb downstream 0.5kb downstream 5575 true Chr10: 8744185-8749759 Glycine max
Glyma.10G078200 0.5kb downstream 0.5kb downstream 500 false Chr10: 8744185-8744684 Glycine max
Glyma.10G078200 1.0kb upstream 1.0kb upstream 6075 true Chr10: 8744685-8750759 Glycine max
Glyma.10G078200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8749760-8750759 Glycine max
Glyma.10G078200 1.0kb downstream 1.0kb downstream 6075 true Chr10: 8743685-8749759 Glycine max
Glyma.10G078200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8743685-8744684 Glycine max
Glyma.10G078200 2.0kb upstream 2.0kb upstream 7075 true Chr10: 8744685-8751759 Glycine max
Glyma.10G078200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8749760-8751759 Glycine max
Glyma.10G078200 2.0kb downstream 2.0kb downstream 7075 true Chr10: 8742685-8749759 Glycine max
Glyma.10G078200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8742685-8744684 Glycine max
Glyma.10G078200 5.0kb upstream 5.0kb upstream 10075 true Chr10: 8744685-8754759 Glycine max
Glyma.10G078200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8749760-8754759 Glycine max
Glyma.10G078200 5.0kb downstream 5.0kb downstream 10075 true Chr10: 8739685-8749759 Glycine max
Glyma.10G078200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8739685-8744684 Glycine max
Glyma.10G078200 10.0kb upstream 10.0kb upstream 15075 true Chr10: 8744685-8759759 Glycine max
Glyma.10G078200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8749760-8759759 Glycine max
Glyma.10G078200 10.0kb downstream 10.0kb downstream 15075 true Chr10: 8734685-8749759 Glycine max
Glyma.10G078200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8734685-8744684 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306219 5265 Fabidae View MSA
124067172 5270 Rosid View MSA
123739560 5271 Pentapetalae View MSA
122789212 5272 Eudicot View MSA
122042305 5273 Angiosperm View MSA
121345510 5274 Embryophyte View MSA
123428750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.03999 0.0 4.20872   Low
cufflinks 3.0168 0.0 11.6546   High
cufflinks 2.53091 0.0 10.2737    
cufflinks 1.66135 0.0 6.00339    
cufflinks 2.77811 0.0 8.4483   High
cufflinks 0.980375 0.0 4.01271   Low
cufflinks 1.11982 0.0 5.89542   Low
cufflinks 2.15548 0.0 9.27615    
cufflinks 2.17017 0.0 7.21673    
cufflinks 0.418        
cufflinks 0.317        
cufflinks 0.354        
cufflinks 0.7        
cufflinks 0.92       High
cufflinks 0.796        
cufflinks 0.542        
cufflinks 0.164       Low
cufflinks 0.247       Low
cufflinks 1.245       High
cufflinks 0.299        
cufflinks 0.501        
cufflinks 0.437        
cufflinks 0.895       High
cufflinks 0.545        
cufflinks 0.366        
cufflinks 0.596        

0 Strain