Gene : Glyma.10G081900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Genomic Order:  819
Name:  ? Glyma.10G081900 Secondary Identifier:  ? PAC:30474461
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G081900 0.5kb upstream 0.5kb upstream 1802 true Chr10: 9891110-9892911 Glycine max
Glyma.10G081900 0.5kb upstream 0.5kb upstream 500 false Chr10: 9891110-9891609 Glycine max
Glyma.10G081900 0.5kb downstream 0.5kb downstream 1802 true Chr10: 9891610-9893411 Glycine max
Glyma.10G081900 0.5kb downstream 0.5kb downstream 500 false Chr10: 9892912-9893411 Glycine max
Glyma.10G081900 1.0kb upstream 1.0kb upstream 2302 true Chr10: 9890610-9892911 Glycine max
Glyma.10G081900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 9890610-9891609 Glycine max
Glyma.10G081900 1.0kb downstream 1.0kb downstream 2302 true Chr10: 9891610-9893911 Glycine max
Glyma.10G081900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 9892912-9893911 Glycine max
Glyma.10G081900 2.0kb upstream 2.0kb upstream 3302 true Chr10: 9889610-9892911 Glycine max
Glyma.10G081900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 9889610-9891609 Glycine max
Glyma.10G081900 2.0kb downstream 2.0kb downstream 3302 true Chr10: 9891610-9894911 Glycine max
Glyma.10G081900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 9892912-9894911 Glycine max
Glyma.10G081900 5.0kb upstream 5.0kb upstream 6302 true Chr10: 9886610-9892911 Glycine max
Glyma.10G081900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 9886610-9891609 Glycine max
Glyma.10G081900 5.0kb downstream 5.0kb downstream 6302 true Chr10: 9891610-9897911 Glycine max
Glyma.10G081900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 9892912-9897911 Glycine max
Glyma.10G081900 10.0kb upstream 10.0kb upstream 11302 true Chr10: 9881610-9892911 Glycine max
Glyma.10G081900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 9881610-9891609 Glycine max
Glyma.10G081900 10.0kb downstream 10.0kb downstream 11302 true Chr10: 9891610-9902911 Glycine max
Glyma.10G081900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 9892912-9902911 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314147 5265 Fabidae View MSA
124068371 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.15762 0.0 7.29182    
cufflinks 0.0499125 0.0 0.206978 Low Low
cufflinks 0.0336248 0.0 0.143869 Low Low
cufflinks 0.110708 0.0 0.441792 Low  
cufflinks 3.1981 0.0 10.1839    
cufflinks 22.7425 0.0 60.6814   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.7318 0.0 5.98819    
cufflinks 0.847        
cufflinks 63.163     High High
cufflinks 0.082     Low Low
cufflinks 4.393        
cufflinks 2.051        
cufflinks 3.921        
cufflinks 0.442        
cufflinks 101.86     High High
cufflinks 0.051     Low Low
cufflinks 0.235        
cufflinks 0.067     Low Low
cufflinks 110.011     High High
cufflinks 0.103        
cufflinks 0.327        
cufflinks 58.118     High High
cufflinks 0.058     Low Low
cufflinks 153.527     High High

0 Strain