Gene : Glyma.10G083100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR14155//PTHR14155:SF90 - RING FINGER DOMAIN-CONTAINING Genomic Order:  831
Name:  ? Glyma.10G083100 Secondary Identifier:  ? PAC:30474387
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G083100 0.5kb upstream 0.5kb upstream 1536 true Chr10: 10126183-10127718 Glycine max
Glyma.10G083100 0.5kb upstream 0.5kb upstream 500 false Chr10: 10126183-10126682 Glycine max
Glyma.10G083100 0.5kb downstream 0.5kb downstream 1536 true Chr10: 10126683-10128218 Glycine max
Glyma.10G083100 0.5kb downstream 0.5kb downstream 500 false Chr10: 10127719-10128218 Glycine max
Glyma.10G083100 1.0kb upstream 1.0kb upstream 2036 true Chr10: 10125683-10127718 Glycine max
Glyma.10G083100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 10125683-10126682 Glycine max
Glyma.10G083100 1.0kb downstream 1.0kb downstream 2036 true Chr10: 10126683-10128718 Glycine max
Glyma.10G083100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 10127719-10128718 Glycine max
Glyma.10G083100 2.0kb upstream 2.0kb upstream 3036 true Chr10: 10124683-10127718 Glycine max
Glyma.10G083100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 10124683-10126682 Glycine max
Glyma.10G083100 2.0kb downstream 2.0kb downstream 3036 true Chr10: 10126683-10129718 Glycine max
Glyma.10G083100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 10127719-10129718 Glycine max
Glyma.10G083100 5.0kb upstream 5.0kb upstream 6036 true Chr10: 10121683-10127718 Glycine max
Glyma.10G083100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 10121683-10126682 Glycine max
Glyma.10G083100 5.0kb downstream 5.0kb downstream 6036 true Chr10: 10126683-10132718 Glycine max
Glyma.10G083100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 10127719-10132718 Glycine max
Glyma.10G083100 10.0kb upstream 10.0kb upstream 11036 true Chr10: 10116683-10127718 Glycine max
Glyma.10G083100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 10116683-10126682 Glycine max
Glyma.10G083100 10.0kb downstream 10.0kb downstream 11036 true Chr10: 10126683-10137718 Glycine max
Glyma.10G083100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 10127719-10137718 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310251 5265 Fabidae View MSA
124062741 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.427677 0.0 1.64939    
cufflinks 0.0253387 0.0 0.114911 Low Low
cufflinks 5.45504 0.0 17.3407    
cufflinks 0.959457 0.0 3.56294    
cufflinks 5.04099 0.0 16.2283    
cufflinks 9.34961 0.0 27.6127   High
cufflinks 0.639331 0.0 2.41995    
cufflinks 0.124692 0.0 0.503014 Low Low
cufflinks 5.01503 0.0 16.1    
cufflinks 0.242        
cufflinks 13.856     High High
cufflinks 2.269        
cufflinks 4.531        
cufflinks 4.766        
cufflinks 0.77        
cufflinks 0.225        
cufflinks 1.843        
cufflinks 5.195        
cufflinks 0.036     Low Low
cufflinks 0.185        
cufflinks 15.926     High High
cufflinks 0.279        
cufflinks 0.153        
cufflinks 24.371     High High
cufflinks 0.047     Low Low
cufflinks 12.467     High High

0 Strain