Gene : Glyma.10G062700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR24098:SF5 - ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  627
Name:  ? Glyma.10G062700 Secondary Identifier:  ? PAC:30474288
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G062700 0.5kb upstream 0.5kb upstream 12095 true Chr10: 5903310-5915404 Glycine max
Glyma.10G062700 0.5kb upstream 0.5kb upstream 500 false Chr10: 5914905-5915404 Glycine max
Glyma.10G062700 0.5kb downstream 0.5kb downstream 12095 true Chr10: 5902810-5914904 Glycine max
Glyma.10G062700 0.5kb downstream 0.5kb downstream 500 false Chr10: 5902810-5903309 Glycine max
Glyma.10G062700 1.0kb upstream 1.0kb upstream 12595 true Chr10: 5903310-5915904 Glycine max
Glyma.10G062700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5914905-5915904 Glycine max
Glyma.10G062700 1.0kb downstream 1.0kb downstream 12595 true Chr10: 5902310-5914904 Glycine max
Glyma.10G062700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5902310-5903309 Glycine max
Glyma.10G062700 2.0kb upstream 2.0kb upstream 13595 true Chr10: 5903310-5916904 Glycine max
Glyma.10G062700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5914905-5916904 Glycine max
Glyma.10G062700 2.0kb downstream 2.0kb downstream 13595 true Chr10: 5901310-5914904 Glycine max
Glyma.10G062700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5901310-5903309 Glycine max
Glyma.10G062700 5.0kb upstream 5.0kb upstream 16595 true Chr10: 5903310-5919904 Glycine max
Glyma.10G062700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5914905-5919904 Glycine max
Glyma.10G062700 5.0kb downstream 5.0kb downstream 16595 true Chr10: 5898310-5914904 Glycine max
Glyma.10G062700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5898310-5903309 Glycine max
Glyma.10G062700 10.0kb upstream 10.0kb upstream 21595 true Chr10: 5903310-5924904 Glycine max
Glyma.10G062700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5914905-5924904 Glycine max
Glyma.10G062700 10.0kb downstream 10.0kb downstream 21595 true Chr10: 5893310-5914904 Glycine max
Glyma.10G062700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5893310-5903309 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296901 5265 Fabidae View MSA
124068240 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.16105 0.0 14.1783    
cufflinks 6.5246 0.0 17.669   High
cufflinks 4.07848 0.0 11.4432    
cufflinks 7.24128 0.0 19.499   High
cufflinks 4.95356 0.0 13.6533    
cufflinks 2.79565 0.0 8.19658   Low
cufflinks 5.67659 0.0 15.4986    
cufflinks 4.33845 0.0 12.1032    
cufflinks 3.71709 0.0 10.5388    
cufflinks 1.224        
cufflinks 0.337       Low
cufflinks 1.506        
cufflinks 0.934        
cufflinks 0.863        
cufflinks 0.741        
cufflinks 1.587        
cufflinks 0.946        
cufflinks 1.654        
cufflinks 2.135       High
cufflinks 1.717        
cufflinks 0.449       Low
cufflinks 1.701        
cufflinks 1.732        
cufflinks 0.435       Low
cufflinks 1.558        
cufflinks 0.632        

0 Strain