Gene : Glyma.10G064000 G. max Wm82.a2.v1
Defline:  (1 of 2) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase Genomic Order:  640
Name:  ? Glyma.10G064000 Secondary Identifier:  ? PAC:30475358
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax BRANCHED-CHAIN-AA-SYN-PWY Glycine max pathologic  
Gmax ILEUSYN-PWY Glycine max pathologic  
Gmax PWY-3001 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G064000 0.5kb upstream 0.5kb upstream 5185 true Chr10: 6062926-6068110 Glycine max
Glyma.10G064000 0.5kb upstream 0.5kb upstream 500 false Chr10: 6062926-6063425 Glycine max
Glyma.10G064000 0.5kb downstream 0.5kb downstream 5185 true Chr10: 6063426-6068610 Glycine max
Glyma.10G064000 0.5kb downstream 0.5kb downstream 500 false Chr10: 6068111-6068610 Glycine max
Glyma.10G064000 1.0kb upstream 1.0kb upstream 5685 true Chr10: 6062426-6068110 Glycine max
Glyma.10G064000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6062426-6063425 Glycine max
Glyma.10G064000 1.0kb downstream 1.0kb downstream 5685 true Chr10: 6063426-6069110 Glycine max
Glyma.10G064000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6068111-6069110 Glycine max
Glyma.10G064000 2.0kb upstream 2.0kb upstream 6685 true Chr10: 6061426-6068110 Glycine max
Glyma.10G064000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6061426-6063425 Glycine max
Glyma.10G064000 2.0kb downstream 2.0kb downstream 6685 true Chr10: 6063426-6070110 Glycine max
Glyma.10G064000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6068111-6070110 Glycine max
Glyma.10G064000 5.0kb upstream 5.0kb upstream 9685 true Chr10: 6058426-6068110 Glycine max
Glyma.10G064000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6058426-6063425 Glycine max
Glyma.10G064000 5.0kb downstream 5.0kb downstream 9685 true Chr10: 6063426-6073110 Glycine max
Glyma.10G064000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6068111-6073110 Glycine max
Glyma.10G064000 10.0kb upstream 10.0kb upstream 14685 true Chr10: 6053426-6068110 Glycine max
Glyma.10G064000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6053426-6063425 Glycine max
Glyma.10G064000 10.0kb downstream 10.0kb downstream 14685 true Chr10: 6063426-6078110 Glycine max
Glyma.10G064000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6068111-6078110 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040897 5273 Angiosperm View MSA
122301821 5265 Fabidae View MSA
124062087 5270 Rosid View MSA
123737037 5271 Pentapetalae View MSA
122787691 5272 Eudicot View MSA
121344792 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.79 0.0 53.3237    
cufflinks 11.432 0.0 30.532    
cufflinks 11.59 0.0 30.9434    
cufflinks 22.1726 0.0 60.0342 High High
cufflinks 15.0888 0.0 40.315    
cufflinks 6.67301 0.0 18.1829   Low
cufflinks 22.9804 0.0 62.4417 High High
cufflinks 13.2158 0.0 35.2581    
cufflinks 14.7282 0.0 39.3267    
cufflinks 5.514        
cufflinks 4.165        
cufflinks 6.41        
cufflinks 7.122       High
cufflinks 6.084        
cufflinks 3.561       Low
cufflinks 4.69        
cufflinks 6.019        
cufflinks 6.62        
cufflinks 9.964     High High
cufflinks 3.878       Low
cufflinks 4.154        
cufflinks 4.827        
cufflinks 6.055        
cufflinks 4.908        
cufflinks 3.853       Low
cufflinks 5.987        

0 Strain