Gene : Glyma.10G050700 G. max Wm82.a2.v1
Defline:  (1 of 4) PF04689 - DNA binding protein S1FA (S1FA) Genomic Order:  507
Name:  ? Glyma.10G050700 Secondary Identifier:  ? PAC:30475161
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G050700 0.5kb upstream 0.5kb upstream 3100 true Chr10: 4550343-4553442 Glycine max
Glyma.10G050700 0.5kb upstream 0.5kb upstream 500 false Chr10: 4552943-4553442 Glycine max
Glyma.10G050700 0.5kb downstream 0.5kb downstream 3100 true Chr10: 4549843-4552942 Glycine max
Glyma.10G050700 0.5kb downstream 0.5kb downstream 500 false Chr10: 4549843-4550342 Glycine max
Glyma.10G050700 1.0kb upstream 1.0kb upstream 3600 true Chr10: 4550343-4553942 Glycine max
Glyma.10G050700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4552943-4553942 Glycine max
Glyma.10G050700 1.0kb downstream 1.0kb downstream 3600 true Chr10: 4549343-4552942 Glycine max
Glyma.10G050700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4549343-4550342 Glycine max
Glyma.10G050700 2.0kb upstream 2.0kb upstream 4600 true Chr10: 4550343-4554942 Glycine max
Glyma.10G050700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4552943-4554942 Glycine max
Glyma.10G050700 2.0kb downstream 2.0kb downstream 4600 true Chr10: 4548343-4552942 Glycine max
Glyma.10G050700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4548343-4550342 Glycine max
Glyma.10G050700 5.0kb upstream 5.0kb upstream 7600 true Chr10: 4550343-4557942 Glycine max
Glyma.10G050700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4552943-4557942 Glycine max
Glyma.10G050700 5.0kb downstream 5.0kb downstream 7600 true Chr10: 4545343-4552942 Glycine max
Glyma.10G050700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4545343-4550342 Glycine max
Glyma.10G050700 10.0kb upstream 10.0kb upstream 12600 true Chr10: 4550343-4562942 Glycine max
Glyma.10G050700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4552943-4562942 Glycine max
Glyma.10G050700 10.0kb downstream 10.0kb downstream 12600 true Chr10: 4540343-4552942 Glycine max
Glyma.10G050700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4540343-4550342 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314911 5265 Fabidae View MSA
124072981 5270 Rosid View MSA
123737757 5271 Pentapetalae View MSA
122787039 5272 Eudicot View MSA
122043521 5273 Angiosperm View MSA
121348101 5274 Embryophyte View MSA
123427366 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.2932 0.0 176.863 High Low
cufflinks 99.6156 0.0 268.011 High  
cufflinks 66.8544 0.0 178.36 High Low
cufflinks 66.5685 0.0 177.599 High Low
cufflinks 117.851 0.0 320.126 High  
cufflinks 205.04 0.0 585.751 High High
cufflinks 214.963 0.0 618.66 High High
cufflinks 109.97 0.0 297.838 High  
cufflinks 100.969 0.0 271.931 High  
cufflinks 19.698     High High
cufflinks 14.857     High  
cufflinks 12.57     High  
cufflinks 23.69     High High
cufflinks 24.812     High High
cufflinks 13.338     High  
cufflinks 13.299     High  
cufflinks 10.292     High Low
cufflinks 14.002     High  
cufflinks 17.326     High  
cufflinks 10.619     High Low
cufflinks 18.894     High  
cufflinks 11.661     High  
cufflinks 13.306     High  
cufflinks 17.158     High  
cufflinks 11.355     High Low
cufflinks 18.198     High  

0 Strain