Gene : Glyma.10G053700 G. max Wm82.a2.v1
Defline:  (1 of 40) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  537
Name:  ? Glyma.10G053700 Secondary Identifier:  ? PAC:30477369
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G053700 0.5kb upstream 0.5kb upstream 4416 true Chr10: 4867238-4871653 Glycine max
Glyma.10G053700 0.5kb upstream 0.5kb upstream 500 false Chr10: 4867238-4867737 Glycine max
Glyma.10G053700 0.5kb downstream 0.5kb downstream 4416 true Chr10: 4867738-4872153 Glycine max
Glyma.10G053700 0.5kb downstream 0.5kb downstream 500 false Chr10: 4871654-4872153 Glycine max
Glyma.10G053700 1.0kb upstream 1.0kb upstream 4916 true Chr10: 4866738-4871653 Glycine max
Glyma.10G053700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4866738-4867737 Glycine max
Glyma.10G053700 1.0kb downstream 1.0kb downstream 4916 true Chr10: 4867738-4872653 Glycine max
Glyma.10G053700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4871654-4872653 Glycine max
Glyma.10G053700 2.0kb upstream 2.0kb upstream 5916 true Chr10: 4865738-4871653 Glycine max
Glyma.10G053700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4865738-4867737 Glycine max
Glyma.10G053700 2.0kb downstream 2.0kb downstream 5916 true Chr10: 4867738-4873653 Glycine max
Glyma.10G053700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4871654-4873653 Glycine max
Glyma.10G053700 5.0kb upstream 5.0kb upstream 8916 true Chr10: 4862738-4871653 Glycine max
Glyma.10G053700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4862738-4867737 Glycine max
Glyma.10G053700 5.0kb downstream 5.0kb downstream 8916 true Chr10: 4867738-4876653 Glycine max
Glyma.10G053700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4871654-4876653 Glycine max
Glyma.10G053700 10.0kb upstream 10.0kb upstream 13916 true Chr10: 4857738-4871653 Glycine max
Glyma.10G053700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4857738-4867737 Glycine max
Glyma.10G053700 10.0kb downstream 10.0kb downstream 13916 true Chr10: 4867738-4881653 Glycine max
Glyma.10G053700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4871654-4881653 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297641 5265 Fabidae View MSA
124036097 5270 Rosid View MSA
123743168 5271 Pentapetalae View MSA
122791271 5272 Eudicot View MSA
122050644 5273 Angiosperm View MSA
121312043 5274 Embryophyte View MSA
123349254 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00949393 0.0 0.0429365 Low Low
cufflinks 0.253312 0.0 0.954402   High
cufflinks 0.0057605 0.0 0.0272543 Low Low
cufflinks 0.182264 0.0 0.696675    
cufflinks 0.130625 0.0 0.507377 Low  
cufflinks 0.0530731 0.0 0.213059 Low  
cufflinks 0.0846654 0.0 0.334327 Low  
cufflinks 0.117825 0.0 0.458612 Low  
cufflinks 0.111899 0.0 0.4368 Low  
cufflinks 0.129        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.169        
cufflinks 0.065     Low  
cufflinks 0.147        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.031     Low  
cufflinks 0.687       High
cufflinks 0.071     Low  
cufflinks 0.014     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.01     Low Low

0 Strain