Gene : Glyma.10G054400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13068:SF5 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN Genomic Order:  544
Name:  ? Glyma.10G054400 Secondary Identifier:  ? PAC:30476665
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G054400 0.5kb upstream 0.5kb upstream 2548 true Chr10: 4941244-4943791 Glycine max
Glyma.10G054400 0.5kb upstream 0.5kb upstream 500 false Chr10: 4941244-4941743 Glycine max
Glyma.10G054400 0.5kb downstream 0.5kb downstream 2548 true Chr10: 4941744-4944291 Glycine max
Glyma.10G054400 0.5kb downstream 0.5kb downstream 500 false Chr10: 4943792-4944291 Glycine max
Glyma.10G054400 1.0kb upstream 1.0kb upstream 3048 true Chr10: 4940744-4943791 Glycine max
Glyma.10G054400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4940744-4941743 Glycine max
Glyma.10G054400 1.0kb downstream 1.0kb downstream 3048 true Chr10: 4941744-4944791 Glycine max
Glyma.10G054400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4943792-4944791 Glycine max
Glyma.10G054400 2.0kb upstream 2.0kb upstream 4048 true Chr10: 4939744-4943791 Glycine max
Glyma.10G054400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4939744-4941743 Glycine max
Glyma.10G054400 2.0kb downstream 2.0kb downstream 4048 true Chr10: 4941744-4945791 Glycine max
Glyma.10G054400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4943792-4945791 Glycine max
Glyma.10G054400 5.0kb upstream 5.0kb upstream 7048 true Chr10: 4936744-4943791 Glycine max
Glyma.10G054400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4936744-4941743 Glycine max
Glyma.10G054400 5.0kb downstream 5.0kb downstream 7048 true Chr10: 4941744-4948791 Glycine max
Glyma.10G054400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4943792-4948791 Glycine max
Glyma.10G054400 10.0kb upstream 10.0kb upstream 12048 true Chr10: 4931744-4943791 Glycine max
Glyma.10G054400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4931744-4941743 Glycine max
Glyma.10G054400 10.0kb downstream 10.0kb downstream 12048 true Chr10: 4941744-4953791 Glycine max
Glyma.10G054400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4943792-4953791 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041051 5273 Angiosperm View MSA
122305278 5265 Fabidae View MSA
124063564 5270 Rosid View MSA
123745270 5271 Pentapetalae View MSA
122786345 5272 Eudicot View MSA
121348638 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4022 0.0 38.4104   High
cufflinks 10.0688 0.0 37.2989   High
cufflinks 3.1708 0.0 14.9808   Low
cufflinks 9.35692 0.0 35.1868    
cufflinks 4.01587 0.0 16.7842    
cufflinks 4.49873 0.0 17.821    
cufflinks 7.81784 0.0 30.5551    
cufflinks 6.6575 0.0 27.2781    
cufflinks 3.69161 0.0 16.1111   Low
cufflinks 2.359        
cufflinks 0.088       Low
cufflinks 1.865        
cufflinks 0.864        
cufflinks 1.035        
cufflinks 0.321        
cufflinks 6.938       High
cufflinks 0.261        
cufflinks 2.626        
cufflinks 3.189        
cufflinks 9.32     High High
cufflinks 0.1       Low
cufflinks 8.125     High High
cufflinks 9.127     High High
cufflinks 0.16       Low
cufflinks 7.609     High High
cufflinks 0.112       Low

0 Strain