Gene : Glyma.10G054500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11964:SF15 - S-ADENOSYLMETHIONINE SYNTHASE 3 Genomic Order:  545
Name:  ? Glyma.10G054500 Secondary Identifier:  ? PAC:30475746
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Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ETHYL-PWY Glycine max pathologic  
Gmax PWY-5041 Glycine max pathologic  
Gmax PWY-7270 Glycine max pathologic  
Gmax PWY-7528 Glycine max pathologic  
Gmax SAM-PWY Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G054500 0.5kb upstream 0.5kb upstream 3370 true Chr10: 4946026-4949395 Glycine max
Glyma.10G054500 0.5kb upstream 0.5kb upstream 500 false Chr10: 4948896-4949395 Glycine max
Glyma.10G054500 0.5kb downstream 0.5kb downstream 3370 true Chr10: 4945526-4948895 Glycine max
Glyma.10G054500 0.5kb downstream 0.5kb downstream 500 false Chr10: 4945526-4946025 Glycine max
Glyma.10G054500 1.0kb upstream 1.0kb upstream 3870 true Chr10: 4946026-4949895 Glycine max
Glyma.10G054500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4948896-4949895 Glycine max
Glyma.10G054500 1.0kb downstream 1.0kb downstream 3870 true Chr10: 4945026-4948895 Glycine max
Glyma.10G054500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4945026-4946025 Glycine max
Glyma.10G054500 2.0kb upstream 2.0kb upstream 4870 true Chr10: 4946026-4950895 Glycine max
Glyma.10G054500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4948896-4950895 Glycine max
Glyma.10G054500 2.0kb downstream 2.0kb downstream 4870 true Chr10: 4944026-4948895 Glycine max
Glyma.10G054500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4944026-4946025 Glycine max
Glyma.10G054500 5.0kb upstream 5.0kb upstream 7870 true Chr10: 4946026-4953895 Glycine max
Glyma.10G054500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4948896-4953895 Glycine max
Glyma.10G054500 5.0kb downstream 5.0kb downstream 7870 true Chr10: 4941026-4948895 Glycine max
Glyma.10G054500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4941026-4946025 Glycine max
Glyma.10G054500 10.0kb upstream 10.0kb upstream 12870 true Chr10: 4946026-4958895 Glycine max
Glyma.10G054500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4948896-4958895 Glycine max
Glyma.10G054500 10.0kb downstream 10.0kb downstream 12870 true Chr10: 4936026-4948895 Glycine max
Glyma.10G054500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4936026-4946025 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305289 5265 Fabidae View MSA
124071193 5270 Rosid View MSA
123752865 5271 Pentapetalae View MSA
122794208 5272 Eudicot View MSA
122047125 5273 Angiosperm View MSA
121349455 5274 Embryophyte View MSA
123428115 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0119853 0.0 0.0542037 Low  
cufflinks 0.236492 0.0 0.904292 Low  
cufflinks 16.3486 0.0 43.6274   High
cufflinks 0.019454 0.0 0.0842664 Low  
cufflinks 0.0202134 0.0 0.0872797 Low  
cufflinks 0.200946 0.0 0.773368 Low  
cufflinks 0.0104221 0.0 0.0477354 Low  
cufflinks 0.0818294 0.0 0.325813 Low  
cufflinks 0.0119548 0.0 0.0540714 Low  
cufflinks 0.081     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.106       High
cufflinks 0.066     Low  
cufflinks 0.068     Low  
cufflinks 0.007     Low Low
cufflinks 0.079     Low  
cufflinks 0.006     Low Low
cufflinks 19.55     High High
cufflinks 0.182        
cufflinks 0.049     Low  
cufflinks 0.013     Low  
cufflinks 0.086     Low  
cufflinks 0.05     Low  
cufflinks 0.013     Low  
cufflinks 0.063     Low  
cufflinks 0.005     Low Low

0 Strain