Gene : Glyma.10G118900 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  1189
Name:  ? Glyma.10G118900 Secondary Identifier:  ? PAC:30477019
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G118900 0.5kb upstream 0.5kb upstream 2354 true Chr10: 30332848-30335201 Glycine max
Glyma.10G118900 0.5kb upstream 0.5kb upstream 500 false Chr10: 30332848-30333347 Glycine max
Glyma.10G118900 0.5kb downstream 0.5kb downstream 2354 true Chr10: 30333348-30335701 Glycine max
Glyma.10G118900 0.5kb downstream 0.5kb downstream 500 false Chr10: 30335202-30335701 Glycine max
Glyma.10G118900 1.0kb upstream 1.0kb upstream 2854 true Chr10: 30332348-30335201 Glycine max
Glyma.10G118900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 30332348-30333347 Glycine max
Glyma.10G118900 1.0kb downstream 1.0kb downstream 2854 true Chr10: 30333348-30336201 Glycine max
Glyma.10G118900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 30335202-30336201 Glycine max
Glyma.10G118900 2.0kb upstream 2.0kb upstream 3854 true Chr10: 30331348-30335201 Glycine max
Glyma.10G118900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 30331348-30333347 Glycine max
Glyma.10G118900 2.0kb downstream 2.0kb downstream 3854 true Chr10: 30333348-30337201 Glycine max
Glyma.10G118900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 30335202-30337201 Glycine max
Glyma.10G118900 5.0kb upstream 5.0kb upstream 6854 true Chr10: 30328348-30335201 Glycine max
Glyma.10G118900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 30328348-30333347 Glycine max
Glyma.10G118900 5.0kb downstream 5.0kb downstream 6854 true Chr10: 30333348-30340201 Glycine max
Glyma.10G118900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 30335202-30340201 Glycine max
Glyma.10G118900 10.0kb upstream 10.0kb upstream 11854 true Chr10: 30323348-30335201 Glycine max
Glyma.10G118900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 30323348-30333347 Glycine max
Glyma.10G118900 10.0kb downstream 10.0kb downstream 11854 true Chr10: 30333348-30345201 Glycine max
Glyma.10G118900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 30335202-30345201 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314182 5265 Fabidae View MSA
124063509 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.3066 0.0 223.74 High High
cufflinks 5.9669 0.0 16.9068    
cufflinks 27.9914 0.0 75.5328 High  
cufflinks 4.49112 0.0 13.1522   Low
cufflinks 14.9556 0.0 39.9988    
cufflinks 71.3946 0.0 210.511 High High
cufflinks 2.56826 0.0 8.18581   Low
cufflinks 16.7216 0.0 44.6147    
cufflinks 29.359 0.0 79.2992 High  
cufflinks 27.106     High  
cufflinks 55.89     High  
cufflinks 45.243     High  
cufflinks 17.333     High  
cufflinks 8.686     High Low
cufflinks 71.682     High High
cufflinks 80.575     High High
cufflinks 4.33       Low
cufflinks 43.357     High  
cufflinks 10.724     High Low
cufflinks 51.59     High  
cufflinks 39.945     High  
cufflinks 47.804     High  
cufflinks 18.087     High  
cufflinks 69.0     High High
cufflinks 26.675     High  
cufflinks 39.685     High  

0 Strain