Gene : Glyma.10G100400 G. max Wm82.a2.v1
Defline:  (1 of 10) PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) Genomic Order:  1004
Name:  ? Glyma.10G100400 Secondary Identifier:  ? PAC:30475426
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G100400 0.5kb upstream 0.5kb upstream 4612 true Chr10: 18318010-18322621 Glycine max
Glyma.10G100400 0.5kb upstream 0.5kb upstream 500 false Chr10: 18322122-18322621 Glycine max
Glyma.10G100400 0.5kb downstream 0.5kb downstream 4612 true Chr10: 18317510-18322121 Glycine max
Glyma.10G100400 0.5kb downstream 0.5kb downstream 500 false Chr10: 18317510-18318009 Glycine max
Glyma.10G100400 1.0kb upstream 1.0kb upstream 5112 true Chr10: 18318010-18323121 Glycine max
Glyma.10G100400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 18322122-18323121 Glycine max
Glyma.10G100400 1.0kb downstream 1.0kb downstream 5112 true Chr10: 18317010-18322121 Glycine max
Glyma.10G100400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 18317010-18318009 Glycine max
Glyma.10G100400 2.0kb upstream 2.0kb upstream 6112 true Chr10: 18318010-18324121 Glycine max
Glyma.10G100400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 18322122-18324121 Glycine max
Glyma.10G100400 2.0kb downstream 2.0kb downstream 6112 true Chr10: 18316010-18322121 Glycine max
Glyma.10G100400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 18316010-18318009 Glycine max
Glyma.10G100400 5.0kb upstream 5.0kb upstream 9112 true Chr10: 18318010-18327121 Glycine max
Glyma.10G100400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 18322122-18327121 Glycine max
Glyma.10G100400 5.0kb downstream 5.0kb downstream 9112 true Chr10: 18313010-18322121 Glycine max
Glyma.10G100400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 18313010-18318009 Glycine max
Glyma.10G100400 10.0kb upstream 10.0kb upstream 14112 true Chr10: 18318010-18332121 Glycine max
Glyma.10G100400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 18322122-18332121 Glycine max
Glyma.10G100400 10.0kb downstream 10.0kb downstream 14112 true Chr10: 18308010-18322121 Glycine max
Glyma.10G100400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 18308010-18318009 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314270 5265 Fabidae View MSA
124070984 5270 Rosid View MSA
123746400 5271 Pentapetalae View MSA
122787606 5272 Eudicot View MSA
122046013 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.36659 0.0 25.0232   High
cufflinks 5.57373 0.0 15.2141   Low
cufflinks 7.83431 0.0 21.0088    
cufflinks 7.56585 0.0 20.3236    
cufflinks 7.86 0.0 21.0906    
cufflinks 7.65403 0.0 20.5481    
cufflinks 5.97969 0.0 16.2693    
cufflinks 6.62456 0.0 17.8847    
cufflinks 5.91817 0.0 16.0831   Low
cufflinks 3.8        
cufflinks 3.114        
cufflinks 5.275       High
cufflinks 4.756       High
cufflinks 4.852       High
cufflinks 1.848       Low
cufflinks 2.309       Low
cufflinks 2.735        
cufflinks 4.699       High
cufflinks 4.925       High
cufflinks 2.538        
cufflinks 2.722        
cufflinks 3.042        
cufflinks 2.8        
cufflinks 3.834        
cufflinks 2.177       Low
cufflinks 2.81        

0 Strain