Gene : Glyma.10G147000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11850//PTHR11850:SF102 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS Genomic Order:  1470
Name:  ? Glyma.10G147000 Secondary Identifier:  ? PAC:30474584
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G147000 0.5kb upstream 0.5kb upstream 5698 true Chr10: 38229928-38235625 Glycine max
Glyma.10G147000 0.5kb upstream 0.5kb upstream 500 false Chr10: 38229928-38230427 Glycine max
Glyma.10G147000 0.5kb downstream 0.5kb downstream 5698 true Chr10: 38230428-38236125 Glycine max
Glyma.10G147000 0.5kb downstream 0.5kb downstream 500 false Chr10: 38235626-38236125 Glycine max
Glyma.10G147000 1.0kb upstream 1.0kb upstream 6198 true Chr10: 38229428-38235625 Glycine max
Glyma.10G147000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 38229428-38230427 Glycine max
Glyma.10G147000 1.0kb downstream 1.0kb downstream 6198 true Chr10: 38230428-38236625 Glycine max
Glyma.10G147000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 38235626-38236625 Glycine max
Glyma.10G147000 2.0kb upstream 2.0kb upstream 7198 true Chr10: 38228428-38235625 Glycine max
Glyma.10G147000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 38228428-38230427 Glycine max
Glyma.10G147000 2.0kb downstream 2.0kb downstream 7198 true Chr10: 38230428-38237625 Glycine max
Glyma.10G147000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 38235626-38237625 Glycine max
Glyma.10G147000 5.0kb upstream 5.0kb upstream 10198 true Chr10: 38225428-38235625 Glycine max
Glyma.10G147000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 38225428-38230427 Glycine max
Glyma.10G147000 5.0kb downstream 5.0kb downstream 10198 true Chr10: 38230428-38240625 Glycine max
Glyma.10G147000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 38235626-38240625 Glycine max
Glyma.10G147000 10.0kb upstream 10.0kb upstream 15198 true Chr10: 38220428-38235625 Glycine max
Glyma.10G147000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 38220428-38230427 Glycine max
Glyma.10G147000 10.0kb downstream 10.0kb downstream 15198 true Chr10: 38230428-38245625 Glycine max
Glyma.10G147000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 38235626-38245625 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302839 5265 Fabidae View MSA
124071044 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.906534 0.0 6.51267    
cufflinks 7.5073 0.0 31.2301    
cufflinks 1.58716 0.0 10.8836    
cufflinks 0.700025 0.0 4.40456    
cufflinks 2.62333 0.0 15.4433    
cufflinks 1.57049 0.0 9.14806    
cufflinks 0.0143553 0.0 0.0749218 Low Low
cufflinks 14.8277 0.0 59.0956   High
cufflinks 1.41465 0.0 6.02528    
cufflinks 1.597       High
cufflinks 0.021     Low Low
cufflinks 0.227        
cufflinks 0.168        
cufflinks 0.229        
cufflinks 0.028     Low  
cufflinks 0.035     Low  
cufflinks 0.109        
cufflinks 0.381       High
cufflinks 0.426       High
cufflinks 0.052     Low  
cufflinks 0.041     Low  
cufflinks 0.043     Low  
cufflinks 0.018     Low Low
cufflinks 0.011     Low Low
cufflinks 0.042     Low  
cufflinks 0.053     Low  

0 Strain