Gene : Glyma.10G137800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR30612 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM Genomic Order:  1378
Name:  ? Glyma.10G137800 Secondary Identifier:  ? PAC:30474233
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G137800 0.5kb upstream 0.5kb upstream 12330 true Chr10: 37157826-37170155 Glycine max
Glyma.10G137800 0.5kb upstream 0.5kb upstream 500 false Chr10: 37157826-37158325 Glycine max
Glyma.10G137800 0.5kb downstream 0.5kb downstream 12330 true Chr10: 37158326-37170655 Glycine max
Glyma.10G137800 0.5kb downstream 0.5kb downstream 500 false Chr10: 37170156-37170655 Glycine max
Glyma.10G137800 1.0kb upstream 1.0kb upstream 12830 true Chr10: 37157326-37170155 Glycine max
Glyma.10G137800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 37157326-37158325 Glycine max
Glyma.10G137800 1.0kb downstream 1.0kb downstream 12830 true Chr10: 37158326-37171155 Glycine max
Glyma.10G137800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 37170156-37171155 Glycine max
Glyma.10G137800 2.0kb upstream 2.0kb upstream 13830 true Chr10: 37156326-37170155 Glycine max
Glyma.10G137800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 37156326-37158325 Glycine max
Glyma.10G137800 2.0kb downstream 2.0kb downstream 13830 true Chr10: 37158326-37172155 Glycine max
Glyma.10G137800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 37170156-37172155 Glycine max
Glyma.10G137800 5.0kb upstream 5.0kb upstream 16830 true Chr10: 37153326-37170155 Glycine max
Glyma.10G137800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 37153326-37158325 Glycine max
Glyma.10G137800 5.0kb downstream 5.0kb downstream 16830 true Chr10: 37158326-37175155 Glycine max
Glyma.10G137800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 37170156-37175155 Glycine max
Glyma.10G137800 10.0kb upstream 10.0kb upstream 21830 true Chr10: 37148326-37170155 Glycine max
Glyma.10G137800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 37148326-37158325 Glycine max
Glyma.10G137800 10.0kb downstream 10.0kb downstream 21830 true Chr10: 37158326-37180155 Glycine max
Glyma.10G137800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 37170156-37180155 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309519 5265 Fabidae View MSA
124067492 5270 Rosid View MSA
123740591 5271 Pentapetalae View MSA
122790576 5272 Eudicot View MSA
122047276 5273 Angiosperm View MSA
121346470 5274 Embryophyte View MSA
123428614 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.321 0.0 47.4643   High
cufflinks 13.1165 0.0 35.3134    
cufflinks 9.07311 0.0 24.212    
cufflinks 7.4309 0.0 19.8433    
cufflinks 4.07121 0.0 11.164    
cufflinks 1.86419 0.0 5.57172   Low
cufflinks 10.4691 0.0 27.9883    
cufflinks 5.61682 0.0 15.1208    
cufflinks 4.63714 0.0 12.6085    
cufflinks 2.938        
cufflinks 1.098        
cufflinks 3.698        
cufflinks 0.672       Low
cufflinks 0.637       Low
cufflinks 2.374        
cufflinks 15.899     High High
cufflinks 0.932        
cufflinks 3.255        
cufflinks 5.506        
cufflinks 19.843     High High
cufflinks 1.302        
cufflinks 17.284     High High
cufflinks 10.099     High  
cufflinks 1.207        
cufflinks 17.167     High High
cufflinks 0.82       Low

0 Strain