Gene : Glyma.10G139700 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR31238:SF39 - GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 1-RELATED Genomic Order:  1397
Name:  ? Glyma.10G139700 Secondary Identifier:  ? PAC:30475655
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G139700 0.5kb upstream 0.5kb upstream 1721 true Chr10: 37333783-37335503 Glycine max
Glyma.10G139700 0.5kb upstream 0.5kb upstream 500 false Chr10: 37333783-37334282 Glycine max
Glyma.10G139700 0.5kb downstream 0.5kb downstream 1721 true Chr10: 37334283-37336003 Glycine max
Glyma.10G139700 0.5kb downstream 0.5kb downstream 500 false Chr10: 37335504-37336003 Glycine max
Glyma.10G139700 1.0kb upstream 1.0kb upstream 2221 true Chr10: 37333283-37335503 Glycine max
Glyma.10G139700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 37333283-37334282 Glycine max
Glyma.10G139700 1.0kb downstream 1.0kb downstream 2221 true Chr10: 37334283-37336503 Glycine max
Glyma.10G139700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 37335504-37336503 Glycine max
Glyma.10G139700 2.0kb upstream 2.0kb upstream 3221 true Chr10: 37332283-37335503 Glycine max
Glyma.10G139700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 37332283-37334282 Glycine max
Glyma.10G139700 2.0kb downstream 2.0kb downstream 3221 true Chr10: 37334283-37337503 Glycine max
Glyma.10G139700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 37335504-37337503 Glycine max
Glyma.10G139700 5.0kb upstream 5.0kb upstream 6221 true Chr10: 37329283-37335503 Glycine max
Glyma.10G139700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 37329283-37334282 Glycine max
Glyma.10G139700 5.0kb downstream 5.0kb downstream 6221 true Chr10: 37334283-37340503 Glycine max
Glyma.10G139700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 37335504-37340503 Glycine max
Glyma.10G139700 10.0kb upstream 10.0kb upstream 11221 true Chr10: 37324283-37335503 Glycine max
Glyma.10G139700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 37324283-37334282 Glycine max
Glyma.10G139700 10.0kb downstream 10.0kb downstream 11221 true Chr10: 37334283-37345503 Glycine max
Glyma.10G139700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 37335504-37345503 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041466 5273 Angiosperm View MSA
122308579 5265 Fabidae View MSA
124073822 5270 Rosid View MSA
123750442 5271 Pentapetalae View MSA
122795274 5272 Eudicot View MSA
121349986 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.89715 0.0 17.9728    
cufflinks 5.88852 0.0 17.8747    
cufflinks 2.76061 0.0 9.2809    
cufflinks 39.3582 0.0 105.407 High  
cufflinks 12.5169 0.0 34.7944    
cufflinks 1.20894 0.0 4.37934    
cufflinks 0.35159 0.0 1.35362   Low
cufflinks 122.712 0.0 366.209 High High
cufflinks 24.7335 0.0 66.1062 High  
cufflinks 55.81     High High
cufflinks 2.342        
cufflinks 1.908        
cufflinks 10.533     High  
cufflinks 0.277       Low
cufflinks 1.436        
cufflinks 5.215        
cufflinks 16.227     High High
cufflinks 5.767        
cufflinks 5.252        
cufflinks 5.97        
cufflinks 3.604        
cufflinks 6.754        
cufflinks 4.258        
cufflinks 1.517        
cufflinks 4.363        
cufflinks 5.602        

0 Strain