Gene : Glyma.10G128700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23023:SF141 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED Genomic Order:  1287
Name:  ? Glyma.10G128700 Secondary Identifier:  ? PAC:30474479
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWYDQC-4 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G128700 0.5kb upstream 0.5kb upstream 3268 true Chr10: 34186431-34189698 Glycine max
Glyma.10G128700 0.5kb upstream 0.5kb upstream 500 false Chr10: 34189199-34189698 Glycine max
Glyma.10G128700 0.5kb downstream 0.5kb downstream 3268 true Chr10: 34185931-34189198 Glycine max
Glyma.10G128700 0.5kb downstream 0.5kb downstream 500 false Chr10: 34185931-34186430 Glycine max
Glyma.10G128700 1.0kb upstream 1.0kb upstream 3768 true Chr10: 34186431-34190198 Glycine max
Glyma.10G128700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 34189199-34190198 Glycine max
Glyma.10G128700 1.0kb downstream 1.0kb downstream 3768 true Chr10: 34185431-34189198 Glycine max
Glyma.10G128700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 34185431-34186430 Glycine max
Glyma.10G128700 2.0kb upstream 2.0kb upstream 4768 true Chr10: 34186431-34191198 Glycine max
Glyma.10G128700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 34189199-34191198 Glycine max
Glyma.10G128700 2.0kb downstream 2.0kb downstream 4768 true Chr10: 34184431-34189198 Glycine max
Glyma.10G128700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 34184431-34186430 Glycine max
Glyma.10G128700 5.0kb upstream 5.0kb upstream 7768 true Chr10: 34186431-34194198 Glycine max
Glyma.10G128700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 34189199-34194198 Glycine max
Glyma.10G128700 5.0kb downstream 5.0kb downstream 7768 true Chr10: 34181431-34189198 Glycine max
Glyma.10G128700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 34181431-34186430 Glycine max
Glyma.10G128700 10.0kb upstream 10.0kb upstream 12768 true Chr10: 34186431-34199198 Glycine max
Glyma.10G128700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 34189199-34199198 Glycine max
Glyma.10G128700 10.0kb downstream 10.0kb downstream 12768 true Chr10: 34176431-34189198 Glycine max
Glyma.10G128700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 34176431-34186430 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308487 5265 Fabidae View MSA
124073695 5270 Rosid View MSA
123751619 5271 Pentapetalae View MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0462053 0.0 0.187314 Low Low
cufflinks 0.0286307 0.0 0.119259 Low Low
cufflinks 0.792023 0.0 2.82161    
cufflinks 1.24722 0.0 4.26779   High
cufflinks 0.344175 0.0 1.28637    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.368432 0.0 1.37199    
cufflinks 0.011     Low Low
cufflinks 0.335        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.646       High
cufflinks 1.797       High
cufflinks 0.071        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.228        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.233        
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.375        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.933        

0 Strain