Gene : Glyma.10G133100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11760//PTHR11760:SF22 - 30S/40S RIBOSOMAL PROTEIN S3 Genomic Order:  1331
Name:  ? Glyma.10G133100 Secondary Identifier:  ? PAC:30476076
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G133100 0.5kb upstream 0.5kb upstream 2539 true Chr10: 35789948-35792486 Glycine max
Glyma.10G133100 0.5kb upstream 0.5kb upstream 500 false Chr10: 35789948-35790447 Glycine max
Glyma.10G133100 0.5kb downstream 0.5kb downstream 2539 true Chr10: 35790448-35792986 Glycine max
Glyma.10G133100 0.5kb downstream 0.5kb downstream 500 false Chr10: 35792487-35792986 Glycine max
Glyma.10G133100 1.0kb upstream 1.0kb upstream 3039 true Chr10: 35789448-35792486 Glycine max
Glyma.10G133100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 35789448-35790447 Glycine max
Glyma.10G133100 1.0kb downstream 1.0kb downstream 3039 true Chr10: 35790448-35793486 Glycine max
Glyma.10G133100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 35792487-35793486 Glycine max
Glyma.10G133100 2.0kb upstream 2.0kb upstream 4039 true Chr10: 35788448-35792486 Glycine max
Glyma.10G133100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 35788448-35790447 Glycine max
Glyma.10G133100 2.0kb downstream 2.0kb downstream 4039 true Chr10: 35790448-35794486 Glycine max
Glyma.10G133100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 35792487-35794486 Glycine max
Glyma.10G133100 5.0kb upstream 5.0kb upstream 7039 true Chr10: 35785448-35792486 Glycine max
Glyma.10G133100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 35785448-35790447 Glycine max
Glyma.10G133100 5.0kb downstream 5.0kb downstream 7039 true Chr10: 35790448-35797486 Glycine max
Glyma.10G133100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 35792487-35797486 Glycine max
Glyma.10G133100 10.0kb upstream 10.0kb upstream 12039 true Chr10: 35780448-35792486 Glycine max
Glyma.10G133100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 35780448-35790447 Glycine max
Glyma.10G133100 10.0kb downstream 10.0kb downstream 12039 true Chr10: 35790448-35802486 Glycine max
Glyma.10G133100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 35792487-35802486 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313356 5265 Fabidae View MSA
124071878 5270 Rosid View MSA
123743530 5271 Pentapetalae View MSA
122790634 5272 Eudicot View MSA
122043820 5273 Angiosperm View MSA
121347963 5274 Embryophyte View MSA
123426422 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 82.7228 0.0 235.425 High  
cufflinks 85.4021 0.0 243.783 High  
cufflinks 51.7653 0.0 140.993 High Low
cufflinks 59.8513 0.0 164.789 High Low
cufflinks 147.393 0.0 458.123 High High
cufflinks 116.612 0.0 347.993 High  
cufflinks 154.743 0.0 484.346 High High
cufflinks 104.001 0.0 305.146 High  
cufflinks 103.491 0.0 303.916 High  
cufflinks 39.212     High  
cufflinks 10.051     High Low
cufflinks 31.306     High  
cufflinks 100.614     High High
cufflinks 143.824     High High
cufflinks 12.329     High Low
cufflinks 30.519     High  
cufflinks 33.319     High  
cufflinks 33.036     High  
cufflinks 43.501     High  
cufflinks 23.484     High  
cufflinks 19.345     High  
cufflinks 25.549     High  
cufflinks 38.952     High  
cufflinks 16.153     High  
cufflinks 28.014     High  
cufflinks 25.081     High  

0 Strain