Gene : Glyma.10G133900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32080:SF4 - CYSTEINE-RICH REPEAT SECRETORY PROTEIN 11-RELATED Genomic Order:  1339
Name:  ? Glyma.10G133900 Secondary Identifier:  ? PAC:30473957
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G133900 0.5kb upstream 0.5kb upstream 3701 true Chr10: 35922575-35926275 Glycine max
Glyma.10G133900 0.5kb upstream 0.5kb upstream 500 false Chr10: 35922575-35923074 Glycine max
Glyma.10G133900 0.5kb downstream 0.5kb downstream 3701 true Chr10: 35923075-35926775 Glycine max
Glyma.10G133900 0.5kb downstream 0.5kb downstream 500 false Chr10: 35926276-35926775 Glycine max
Glyma.10G133900 1.0kb upstream 1.0kb upstream 4201 true Chr10: 35922075-35926275 Glycine max
Glyma.10G133900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 35922075-35923074 Glycine max
Glyma.10G133900 1.0kb downstream 1.0kb downstream 4201 true Chr10: 35923075-35927275 Glycine max
Glyma.10G133900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 35926276-35927275 Glycine max
Glyma.10G133900 2.0kb upstream 2.0kb upstream 5201 true Chr10: 35921075-35926275 Glycine max
Glyma.10G133900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 35921075-35923074 Glycine max
Glyma.10G133900 2.0kb downstream 2.0kb downstream 5201 true Chr10: 35923075-35928275 Glycine max
Glyma.10G133900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 35926276-35928275 Glycine max
Glyma.10G133900 5.0kb upstream 5.0kb upstream 8201 true Chr10: 35918075-35926275 Glycine max
Glyma.10G133900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 35918075-35923074 Glycine max
Glyma.10G133900 5.0kb downstream 5.0kb downstream 8201 true Chr10: 35923075-35931275 Glycine max
Glyma.10G133900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 35926276-35931275 Glycine max
Glyma.10G133900 10.0kb upstream 10.0kb upstream 13201 true Chr10: 35913075-35926275 Glycine max
Glyma.10G133900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 35913075-35923074 Glycine max
Glyma.10G133900 10.0kb downstream 10.0kb downstream 13201 true Chr10: 35923075-35936275 Glycine max
Glyma.10G133900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 35926276-35936275 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040946 5273 Angiosperm View MSA
122309337 5265 Fabidae View MSA
124064620 5270 Rosid View MSA
123743595 5271 Pentapetalae View MSA
122793382 5272 Eudicot View MSA
121309775 5274 Embryophyte View MSA
123347437 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.219718 0.0 1.06489   Low
cufflinks 6.47043 0.0 26.7788    
cufflinks 0.712739 0.0 3.23538   Low
cufflinks 4.00204 0.0 16.5883    
cufflinks 5.07347 0.0 22.5545    
cufflinks 9.71083 0.0 36.3346   High
cufflinks 4.24847 0.0 17.1005    
cufflinks 6.25894 0.0 22.7128    
cufflinks 1.85712 0.0 6.83867    
cufflinks 3.636       High
cufflinks 0.01     Low Low
cufflinks 0.776        
cufflinks 1.046        
cufflinks 1.704        
cufflinks 0.013     Low Low
cufflinks 1.567        
cufflinks 0.068     Low  
cufflinks 3.297       High
cufflinks 2.062        
cufflinks 1.072        
cufflinks 0.017     Low Low
cufflinks 1.352        
cufflinks 1.771        
cufflinks 0.023     Low Low
cufflinks 0.979        
cufflinks 0.056     Low  

0 Strain