Gene : Glyma.10G167100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31100:SF3 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 19-RELATED Genomic Order:  1671
Name:  ? Glyma.10G167100 Secondary Identifier:  ? PAC:30476885
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G167100 0.5kb upstream 0.5kb upstream 2259 true Chr10: 40144243-40146501 Glycine max
Glyma.10G167100 0.5kb upstream 0.5kb upstream 500 false Chr10: 40144243-40144742 Glycine max
Glyma.10G167100 0.5kb downstream 0.5kb downstream 2259 true Chr10: 40144743-40147001 Glycine max
Glyma.10G167100 0.5kb downstream 0.5kb downstream 500 false Chr10: 40146502-40147001 Glycine max
Glyma.10G167100 1.0kb upstream 1.0kb upstream 2759 true Chr10: 40143743-40146501 Glycine max
Glyma.10G167100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40143743-40144742 Glycine max
Glyma.10G167100 1.0kb downstream 1.0kb downstream 2759 true Chr10: 40144743-40147501 Glycine max
Glyma.10G167100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40146502-40147501 Glycine max
Glyma.10G167100 2.0kb upstream 2.0kb upstream 3759 true Chr10: 40142743-40146501 Glycine max
Glyma.10G167100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40142743-40144742 Glycine max
Glyma.10G167100 2.0kb downstream 2.0kb downstream 3759 true Chr10: 40144743-40148501 Glycine max
Glyma.10G167100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40146502-40148501 Glycine max
Glyma.10G167100 5.0kb upstream 5.0kb upstream 6759 true Chr10: 40139743-40146501 Glycine max
Glyma.10G167100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40139743-40144742 Glycine max
Glyma.10G167100 5.0kb downstream 5.0kb downstream 6759 true Chr10: 40144743-40151501 Glycine max
Glyma.10G167100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40146502-40151501 Glycine max
Glyma.10G167100 10.0kb upstream 10.0kb upstream 11759 true Chr10: 40134743-40146501 Glycine max
Glyma.10G167100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40134743-40144742 Glycine max
Glyma.10G167100 10.0kb downstream 10.0kb downstream 11759 true Chr10: 40144743-40156501 Glycine max
Glyma.10G167100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40146502-40156501 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313202 5265 Fabidae View MSA
124071129 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.48609 0.0 23.7238    
cufflinks 0.154496 0.0 0.607815 Low Low
cufflinks 1.98215 0.0 6.76385    
cufflinks 0.161571 0.0 0.634206 Low Low
cufflinks 18.2537 0.0 48.7495    
cufflinks 18.2468 0.0 48.7653    
cufflinks 1.09428 0.0 3.89947    
cufflinks 24.3096 0.0 64.8604 High  
cufflinks 14.9972 0.0 40.3389    
cufflinks 1.327        
cufflinks 4.269        
cufflinks 1.056        
cufflinks 5.888        
cufflinks 4.514        
cufflinks 3.364        
cufflinks 0.023     Low Low
cufflinks 13.135     High High
cufflinks 0.554        
cufflinks 0.019     Low Low
cufflinks 0.011     Low Low
cufflinks 8.075     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.205        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.824     High  

0 Strain