Gene : Glyma.10G157300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR28554:SF1 - 39S RIBOSOMAL PROTEIN L45, MITOCHONDRIAL Genomic Order:  1573
Name:  ? Glyma.10G157300 Secondary Identifier:  ? PAC:30474738
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G157300 0.5kb upstream 0.5kb upstream 12002 true Chr10: 39146646-39158647 Glycine max
Glyma.10G157300 0.5kb upstream 0.5kb upstream 500 false Chr10: 39146646-39147145 Glycine max
Glyma.10G157300 0.5kb downstream 0.5kb downstream 12002 true Chr10: 39147146-39159147 Glycine max
Glyma.10G157300 0.5kb downstream 0.5kb downstream 500 false Chr10: 39158648-39159147 Glycine max
Glyma.10G157300 1.0kb upstream 1.0kb upstream 12502 true Chr10: 39146146-39158647 Glycine max
Glyma.10G157300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39146146-39147145 Glycine max
Glyma.10G157300 1.0kb downstream 1.0kb downstream 12502 true Chr10: 39147146-39159647 Glycine max
Glyma.10G157300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39158648-39159647 Glycine max
Glyma.10G157300 2.0kb upstream 2.0kb upstream 13502 true Chr10: 39145146-39158647 Glycine max
Glyma.10G157300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39145146-39147145 Glycine max
Glyma.10G157300 2.0kb downstream 2.0kb downstream 13502 true Chr10: 39147146-39160647 Glycine max
Glyma.10G157300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39158648-39160647 Glycine max
Glyma.10G157300 5.0kb upstream 5.0kb upstream 16502 true Chr10: 39142146-39158647 Glycine max
Glyma.10G157300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39142146-39147145 Glycine max
Glyma.10G157300 5.0kb downstream 5.0kb downstream 16502 true Chr10: 39147146-39163647 Glycine max
Glyma.10G157300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39158648-39163647 Glycine max
Glyma.10G157300 10.0kb upstream 10.0kb upstream 21502 true Chr10: 39137146-39158647 Glycine max
Glyma.10G157300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39137146-39147145 Glycine max
Glyma.10G157300 10.0kb downstream 10.0kb downstream 21502 true Chr10: 39147146-39168647 Glycine max
Glyma.10G157300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39158648-39168647 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314731 5265 Fabidae View MSA
124050340 5270 Rosid View MSA
123738345 5271 Pentapetalae View MSA
122792875 5272 Eudicot View MSA
122048004 5273 Angiosperm View MSA
121346063 5274 Embryophyte View MSA
123424362 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.85303 0.0 6.47024   High
cufflinks 1.61949 0.0 5.69963    
cufflinks 0.55334 0.0 2.07423   Low
cufflinks 1.3661 0.0 4.8706    
cufflinks 1.28381 0.0 4.61285    
cufflinks 0.612223 0.0 2.29014   Low
cufflinks 1.41358 0.0 5.04564    
cufflinks 1.25612 0.0 4.50761    
cufflinks 1.32073 0.0 4.72298    
cufflinks 0.13        
cufflinks 0.051     Low Low
cufflinks 0.337       High
cufflinks 0.269        
cufflinks 0.317       High
cufflinks 0.152        
cufflinks 0.147        
cufflinks 0.089        
cufflinks 0.37       High
cufflinks 0.381       High
cufflinks 0.083     Low  
cufflinks 0.075        
cufflinks 0.137        
cufflinks 0.142        
cufflinks 0.04     Low Low
cufflinks 0.14        
cufflinks 0.069        

0 Strain