Gene : Glyma.10G157700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR13268:SF0 - BREAST CARCINOMA-AMPLIFIED SEQUENCE 3 Genomic Order:  1577
Name:  ? Glyma.10G157700 Secondary Identifier:  ? PAC:30473838
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G157700 0.5kb upstream 0.5kb upstream 7660 true Chr10: 39176537-39184196 Glycine max
Glyma.10G157700 0.5kb upstream 0.5kb upstream 500 false Chr10: 39176537-39177036 Glycine max
Glyma.10G157700 0.5kb downstream 0.5kb downstream 7660 true Chr10: 39177037-39184696 Glycine max
Glyma.10G157700 0.5kb downstream 0.5kb downstream 500 false Chr10: 39184197-39184696 Glycine max
Glyma.10G157700 1.0kb upstream 1.0kb upstream 8160 true Chr10: 39176037-39184196 Glycine max
Glyma.10G157700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39176037-39177036 Glycine max
Glyma.10G157700 1.0kb downstream 1.0kb downstream 8160 true Chr10: 39177037-39185196 Glycine max
Glyma.10G157700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39184197-39185196 Glycine max
Glyma.10G157700 2.0kb upstream 2.0kb upstream 9160 true Chr10: 39175037-39184196 Glycine max
Glyma.10G157700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39175037-39177036 Glycine max
Glyma.10G157700 2.0kb downstream 2.0kb downstream 9160 true Chr10: 39177037-39186196 Glycine max
Glyma.10G157700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39184197-39186196 Glycine max
Glyma.10G157700 5.0kb upstream 5.0kb upstream 12160 true Chr10: 39172037-39184196 Glycine max
Glyma.10G157700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39172037-39177036 Glycine max
Glyma.10G157700 5.0kb downstream 5.0kb downstream 12160 true Chr10: 39177037-39189196 Glycine max
Glyma.10G157700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39184197-39189196 Glycine max
Glyma.10G157700 10.0kb upstream 10.0kb upstream 17160 true Chr10: 39167037-39184196 Glycine max
Glyma.10G157700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39167037-39177036 Glycine max
Glyma.10G157700 10.0kb downstream 10.0kb downstream 17160 true Chr10: 39177037-39194196 Glycine max
Glyma.10G157700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39184197-39194196 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303531 5265 Fabidae View MSA
124063703 5270 Rosid View MSA
123744735 5271 Pentapetalae View MSA
122790134 5272 Eudicot View MSA
122047922 5273 Angiosperm View MSA
121350059 5274 Embryophyte View MSA
123424091 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.27679 0.0 16.8812    
cufflinks 4.77671 0.0 13.0341    
cufflinks 21.6813 0.0 60.278 High High
cufflinks 4.94039 0.0 13.4498    
cufflinks 7.10184 0.0 19.0221    
cufflinks 14.4191 0.0 38.8777   High
cufflinks 3.02724 0.0 8.62769   Low
cufflinks 7.47771 0.0 20.0021    
cufflinks 7.30344 0.0 19.5436    
cufflinks 3.662        
cufflinks 6.962     High  
cufflinks 8.199     High High
cufflinks 5.668        
cufflinks 4.55        
cufflinks 4.554        
cufflinks 3.506        
cufflinks 10.047     High High
cufflinks 3.332       Low
cufflinks 3.532        
cufflinks 3.594        
cufflinks 5.336        
cufflinks 4.115        
cufflinks 3.194       Low
cufflinks 8.477     High High
cufflinks 3.49        
cufflinks 6.183        

0 Strain