Gene : Glyma.10G150000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED Genomic Order:  1500
Name:  ? Glyma.10G150000 Secondary Identifier:  ? PAC:30475032
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G150000 0.5kb upstream 0.5kb upstream 9148 true Chr10: 38527738-38536885 Glycine max
Glyma.10G150000 0.5kb upstream 0.5kb upstream 500 false Chr10: 38536386-38536885 Glycine max
Glyma.10G150000 0.5kb downstream 0.5kb downstream 9148 true Chr10: 38527238-38536385 Glycine max
Glyma.10G150000 0.5kb downstream 0.5kb downstream 500 false Chr10: 38527238-38527737 Glycine max
Glyma.10G150000 1.0kb upstream 1.0kb upstream 9648 true Chr10: 38527738-38537385 Glycine max
Glyma.10G150000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 38536386-38537385 Glycine max
Glyma.10G150000 1.0kb downstream 1.0kb downstream 9648 true Chr10: 38526738-38536385 Glycine max
Glyma.10G150000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 38526738-38527737 Glycine max
Glyma.10G150000 2.0kb upstream 2.0kb upstream 10648 true Chr10: 38527738-38538385 Glycine max
Glyma.10G150000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 38536386-38538385 Glycine max
Glyma.10G150000 2.0kb downstream 2.0kb downstream 10648 true Chr10: 38525738-38536385 Glycine max
Glyma.10G150000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 38525738-38527737 Glycine max
Glyma.10G150000 5.0kb upstream 5.0kb upstream 13648 true Chr10: 38527738-38541385 Glycine max
Glyma.10G150000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 38536386-38541385 Glycine max
Glyma.10G150000 5.0kb downstream 5.0kb downstream 13648 true Chr10: 38522738-38536385 Glycine max
Glyma.10G150000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 38522738-38527737 Glycine max
Glyma.10G150000 10.0kb upstream 10.0kb upstream 18648 true Chr10: 38527738-38546385 Glycine max
Glyma.10G150000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 38536386-38546385 Glycine max
Glyma.10G150000 10.0kb downstream 10.0kb downstream 18648 true Chr10: 38517738-38536385 Glycine max
Glyma.10G150000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 38517738-38527737 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026551 5273 Angiosperm View MSA
122313709 5265 Fabidae View MSA
124065590 5270 Rosid View MSA
123741306 5271 Pentapetalae View MSA
122793057 5272 Eudicot View MSA
121296383 5274 Embryophyte View MSA
123334555 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.4024 0.0 186.728 High High
cufflinks 19.8905 0.0 68.0743    
cufflinks 52.1594 0.0 236.382 High High
cufflinks 39.8608 0.0 163.361 High  
cufflinks 19.4427 0.0 65.3138    
cufflinks 14.9285 0.0 49.8256   Low
cufflinks 35.214 0.0 139.081 High  
cufflinks 18.3715 0.0 62.0651    
cufflinks 27.4536 0.0 101.441 High  
cufflinks 3.733       Low
cufflinks 14.443     High  
cufflinks 12.193     High  
cufflinks 4.275       Low
cufflinks 3.664       Low
cufflinks 12.386     High  
cufflinks 9.904     High  
cufflinks 7.089     High  
cufflinks 10.859     High  
cufflinks 6.568        
cufflinks 15.819     High High
cufflinks 11.787     High  
cufflinks 12.775     High  
cufflinks 7.292        
cufflinks 16.75     High High
cufflinks 11.735     High  
cufflinks 10.576     High  

0 Strain