Gene : Glyma.10G178900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11817:SF14 - PLASTIDIAL PYRUVATE KINASE 1, CHLOROPLASTIC Genomic Order:  1789
Name:  ? Glyma.10G178900 Secondary Identifier:  ? PAC:30477816
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-5723 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G178900 0.5kb upstream 0.5kb upstream 6447 true Chr10: 41198608-41205054 Glycine max
Glyma.10G178900 0.5kb upstream 0.5kb upstream 500 false Chr10: 41198608-41199107 Glycine max
Glyma.10G178900 0.5kb downstream 0.5kb downstream 6447 true Chr10: 41199108-41205554 Glycine max
Glyma.10G178900 0.5kb downstream 0.5kb downstream 500 false Chr10: 41205055-41205554 Glycine max
Glyma.10G178900 1.0kb upstream 1.0kb upstream 6947 true Chr10: 41198108-41205054 Glycine max
Glyma.10G178900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 41198108-41199107 Glycine max
Glyma.10G178900 1.0kb downstream 1.0kb downstream 6947 true Chr10: 41199108-41206054 Glycine max
Glyma.10G178900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 41205055-41206054 Glycine max
Glyma.10G178900 2.0kb upstream 2.0kb upstream 7947 true Chr10: 41197108-41205054 Glycine max
Glyma.10G178900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 41197108-41199107 Glycine max
Glyma.10G178900 2.0kb downstream 2.0kb downstream 7947 true Chr10: 41199108-41207054 Glycine max
Glyma.10G178900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 41205055-41207054 Glycine max
Glyma.10G178900 5.0kb upstream 5.0kb upstream 10947 true Chr10: 41194108-41205054 Glycine max
Glyma.10G178900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 41194108-41199107 Glycine max
Glyma.10G178900 5.0kb downstream 5.0kb downstream 10947 true Chr10: 41199108-41210054 Glycine max
Glyma.10G178900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 41205055-41210054 Glycine max
Glyma.10G178900 10.0kb upstream 10.0kb upstream 15947 true Chr10: 41189108-41205054 Glycine max
Glyma.10G178900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 41189108-41199107 Glycine max
Glyma.10G178900 10.0kb downstream 10.0kb downstream 15947 true Chr10: 41199108-41215054 Glycine max
Glyma.10G178900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 41205055-41215054 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307363 5265 Fabidae View MSA
124069917 5270 Rosid View MSA
123742502 5271 Pentapetalae View MSA
122795154 5272 Eudicot View MSA
122047085 5273 Angiosperm View MSA
121351198 5274 Embryophyte View MSA
123423773 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.5472 0.0 38.8427    
cufflinks 19.6974 0.0 52.6333    
cufflinks 7.28704 0.0 20.0889   Low
cufflinks 18.8996 0.0 50.464    
cufflinks 15.7386 0.0 41.993    
cufflinks 6.80082 0.0 18.8598   Low
cufflinks 52.1735 0.0 149.562 High High
cufflinks 13.7543 0.0 36.7559    
cufflinks 11.4705 0.0 30.7996    
cufflinks 5.118        
cufflinks 0.541       Low
cufflinks 3.608        
cufflinks 4.963        
cufflinks 6.949     High  
cufflinks 1.721        
cufflinks 8.291     High  
cufflinks 1.991        
cufflinks 5.681        
cufflinks 11.312     High High
cufflinks 5.71        
cufflinks 0.927       Low
cufflinks 6.362        
cufflinks 8.258     High  
cufflinks 0.772       Low
cufflinks 6.629        
cufflinks 1.575        

0 Strain