Gene : Glyma.10G182300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31008:SF0 - COP1-INTERACTING PROTEIN-LIKE PROTEIN Genomic Order:  1823
Name:  ? Glyma.10G182300 Secondary Identifier:  ? PAC:30477193
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G182300 0.5kb upstream 0.5kb upstream 9935 true Chr10: 41561015-41570949 Glycine max
Glyma.10G182300 0.5kb upstream 0.5kb upstream 500 false Chr10: 41561015-41561514 Glycine max
Glyma.10G182300 0.5kb downstream 0.5kb downstream 9935 true Chr10: 41561515-41571449 Glycine max
Glyma.10G182300 0.5kb downstream 0.5kb downstream 500 false Chr10: 41570950-41571449 Glycine max
Glyma.10G182300 1.0kb upstream 1.0kb upstream 10435 true Chr10: 41560515-41570949 Glycine max
Glyma.10G182300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 41560515-41561514 Glycine max
Glyma.10G182300 1.0kb downstream 1.0kb downstream 10435 true Chr10: 41561515-41571949 Glycine max
Glyma.10G182300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 41570950-41571949 Glycine max
Glyma.10G182300 2.0kb upstream 2.0kb upstream 11435 true Chr10: 41559515-41570949 Glycine max
Glyma.10G182300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 41559515-41561514 Glycine max
Glyma.10G182300 2.0kb downstream 2.0kb downstream 11435 true Chr10: 41561515-41572949 Glycine max
Glyma.10G182300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 41570950-41572949 Glycine max
Glyma.10G182300 5.0kb upstream 5.0kb upstream 14435 true Chr10: 41556515-41570949 Glycine max
Glyma.10G182300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 41556515-41561514 Glycine max
Glyma.10G182300 5.0kb downstream 5.0kb downstream 14435 true Chr10: 41561515-41575949 Glycine max
Glyma.10G182300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 41570950-41575949 Glycine max
Glyma.10G182300 10.0kb upstream 10.0kb upstream 19435 true Chr10: 41551515-41570949 Glycine max
Glyma.10G182300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 41551515-41561514 Glycine max
Glyma.10G182300 10.0kb downstream 10.0kb downstream 19435 true Chr10: 41561515-41580949 Glycine max
Glyma.10G182300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 41570950-41580949 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299978 5265 Fabidae View MSA
124060773 5270 Rosid View MSA
123744546 5271 Pentapetalae View MSA
122797843 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.94903 0.0 26.893    
cufflinks 9.99795 0.0 27.0386    
cufflinks 14.037 0.0 39.051   High
cufflinks 6.78417 0.0 18.1162   Low
cufflinks 8.10842 0.0 21.722    
cufflinks 15.0954 0.0 42.1289   High
cufflinks 7.49056 0.0 20.0216    
cufflinks 6.43357 0.0 17.1706   Low
cufflinks 10.9601 0.0 29.8003    
cufflinks 2.888       Low
cufflinks 6.349     High  
cufflinks 9.082     High High
cufflinks 7.617     High  
cufflinks 5.996        
cufflinks 4.112       Low
cufflinks 5.961        
cufflinks 4.04       Low
cufflinks 5.595        
cufflinks 7.421        
cufflinks 8.489     High High
cufflinks 6.363     High  
cufflinks 6.823        
cufflinks 3.873       Low
cufflinks 5.963        
cufflinks 7.056     High  
cufflinks 7.495     High  

0 Strain