Gene : Glyma.10G174100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31852:SF48 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  1741
Name:  ? Glyma.10G174100 Secondary Identifier:  ? PAC:30474360
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G174100 0.5kb upstream 0.5kb upstream 1259 true Chr10: 40785837-40787095 Glycine max
Glyma.10G174100 0.5kb upstream 0.5kb upstream 500 false Chr10: 40786596-40787095 Glycine max
Glyma.10G174100 0.5kb downstream 0.5kb downstream 1259 true Chr10: 40785337-40786595 Glycine max
Glyma.10G174100 0.5kb downstream 0.5kb downstream 500 false Chr10: 40785337-40785836 Glycine max
Glyma.10G174100 1.0kb upstream 1.0kb upstream 1759 true Chr10: 40785837-40787595 Glycine max
Glyma.10G174100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40786596-40787595 Glycine max
Glyma.10G174100 1.0kb downstream 1.0kb downstream 1759 true Chr10: 40784837-40786595 Glycine max
Glyma.10G174100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40784837-40785836 Glycine max
Glyma.10G174100 2.0kb upstream 2.0kb upstream 2759 true Chr10: 40785837-40788595 Glycine max
Glyma.10G174100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40786596-40788595 Glycine max
Glyma.10G174100 2.0kb downstream 2.0kb downstream 2759 true Chr10: 40783837-40786595 Glycine max
Glyma.10G174100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40783837-40785836 Glycine max
Glyma.10G174100 5.0kb upstream 5.0kb upstream 5759 true Chr10: 40785837-40791595 Glycine max
Glyma.10G174100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40786596-40791595 Glycine max
Glyma.10G174100 5.0kb downstream 5.0kb downstream 5759 true Chr10: 40780837-40786595 Glycine max
Glyma.10G174100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40780837-40785836 Glycine max
Glyma.10G174100 10.0kb upstream 10.0kb upstream 10759 true Chr10: 40785837-40796595 Glycine max
Glyma.10G174100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40786596-40796595 Glycine max
Glyma.10G174100 10.0kb downstream 10.0kb downstream 10759 true Chr10: 40775837-40786595 Glycine max
Glyma.10G174100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40775837-40785836 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310574 5265 Fabidae View MSA
124070959 5270 Rosid View MSA
123751487 5271 Pentapetalae View MSA
122787858 5272 Eudicot View MSA
122044505 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.451568 0.0 1.74656   Low
cufflinks 0.699751 0.0 2.6545    
cufflinks 0.986506 0.0 3.6808    
cufflinks 0.859179 0.0 3.22577    
cufflinks 1.22057 0.0 4.50576    
cufflinks 1.74345 0.0 6.31561   High
cufflinks 0.513581 0.0 1.97278   Low
cufflinks 1.69976 0.0 6.14544   High
cufflinks 0.913993 0.0 3.42327    
cufflinks 2.343       High
cufflinks 0.321        
cufflinks 0.895        
cufflinks 0.38        
cufflinks 0.556        
cufflinks 0.048     Low Low
cufflinks 0.891        
cufflinks 0.956        
cufflinks 1.444        
cufflinks 0.51        
cufflinks 1.155        
cufflinks 0.272        
cufflinks 1.048        
cufflinks 1.111        
cufflinks 0.689        
cufflinks 0.649        
cufflinks 0.423        

0 Strain