Gene : Glyma.10G212800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31394:SF1 - TRANSMEMBRANE PROTEIN 199 Genomic Order:  2128
Name:  ? Glyma.10G212800 Secondary Identifier:  ? PAC:30477031
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G212800 0.5kb upstream 0.5kb upstream 4335 true Chr10: 44533728-44538062 Glycine max
Glyma.10G212800 0.5kb upstream 0.5kb upstream 500 false Chr10: 44537563-44538062 Glycine max
Glyma.10G212800 0.5kb downstream 0.5kb downstream 4335 true Chr10: 44533228-44537562 Glycine max
Glyma.10G212800 0.5kb downstream 0.5kb downstream 500 false Chr10: 44533228-44533727 Glycine max
Glyma.10G212800 1.0kb upstream 1.0kb upstream 4835 true Chr10: 44533728-44538562 Glycine max
Glyma.10G212800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 44537563-44538562 Glycine max
Glyma.10G212800 1.0kb downstream 1.0kb downstream 4835 true Chr10: 44532728-44537562 Glycine max
Glyma.10G212800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 44532728-44533727 Glycine max
Glyma.10G212800 2.0kb upstream 2.0kb upstream 5835 true Chr10: 44533728-44539562 Glycine max
Glyma.10G212800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 44537563-44539562 Glycine max
Glyma.10G212800 2.0kb downstream 2.0kb downstream 5835 true Chr10: 44531728-44537562 Glycine max
Glyma.10G212800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 44531728-44533727 Glycine max
Glyma.10G212800 5.0kb upstream 5.0kb upstream 8835 true Chr10: 44533728-44542562 Glycine max
Glyma.10G212800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 44537563-44542562 Glycine max
Glyma.10G212800 5.0kb downstream 5.0kb downstream 8835 true Chr10: 44528728-44537562 Glycine max
Glyma.10G212800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 44528728-44533727 Glycine max
Glyma.10G212800 10.0kb upstream 10.0kb upstream 13835 true Chr10: 44533728-44547562 Glycine max
Glyma.10G212800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 44537563-44547562 Glycine max
Glyma.10G212800 10.0kb downstream 10.0kb downstream 13835 true Chr10: 44523728-44537562 Glycine max
Glyma.10G212800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 44523728-44533727 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308398 5265 Fabidae View MSA
124060420 5270 Rosid View MSA
123736376 5271 Pentapetalae View MSA
122786410 5272 Eudicot View MSA
122047904 5273 Angiosperm View MSA
121346393 5274 Embryophyte View MSA
123426086 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.72756 0.0 15.0466    
cufflinks 3.54983 0.0 11.7541    
cufflinks 3.05984 0.0 10.3397   Low
cufflinks 4.66102 0.0 14.8436    
cufflinks 4.27295 0.0 13.7217    
cufflinks 3.85188 0.0 12.5972    
cufflinks 4.4852 0.0 14.3846    
cufflinks 3.28651 0.0 10.9342   Low
cufflinks 5.24515 0.0 16.4152   High
cufflinks 1.302        
cufflinks 0.592       Low
cufflinks 1.478       High
cufflinks 1.62       High
cufflinks 1.61       High
cufflinks 1.042        
cufflinks 1.064        
cufflinks 0.712       Low
cufflinks 1.39        
cufflinks 1.469       High
cufflinks 0.973        
cufflinks 0.821        
cufflinks 1.109        
cufflinks 1.212        
cufflinks 0.756       Low
cufflinks 1.002        
cufflinks 0.767       Low

0 Strain