Gene : Glyma.10G210000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10774:SF62 - SYNAPTOTAGMIN-3 Genomic Order:  2100
Name:  ? Glyma.10G210000 Secondary Identifier:  ? PAC:30475955
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G210000 0.5kb upstream 0.5kb upstream 5906 true Chr10: 44195598-44201503 Glycine max
Glyma.10G210000 0.5kb upstream 0.5kb upstream 500 false Chr10: 44195598-44196097 Glycine max
Glyma.10G210000 0.5kb downstream 0.5kb downstream 5906 true Chr10: 44196098-44202003 Glycine max
Glyma.10G210000 0.5kb downstream 0.5kb downstream 500 false Chr10: 44201504-44202003 Glycine max
Glyma.10G210000 1.0kb upstream 1.0kb upstream 6406 true Chr10: 44195098-44201503 Glycine max
Glyma.10G210000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 44195098-44196097 Glycine max
Glyma.10G210000 1.0kb downstream 1.0kb downstream 6406 true Chr10: 44196098-44202503 Glycine max
Glyma.10G210000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 44201504-44202503 Glycine max
Glyma.10G210000 2.0kb upstream 2.0kb upstream 7406 true Chr10: 44194098-44201503 Glycine max
Glyma.10G210000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 44194098-44196097 Glycine max
Glyma.10G210000 2.0kb downstream 2.0kb downstream 7406 true Chr10: 44196098-44203503 Glycine max
Glyma.10G210000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 44201504-44203503 Glycine max
Glyma.10G210000 5.0kb upstream 5.0kb upstream 10406 true Chr10: 44191098-44201503 Glycine max
Glyma.10G210000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 44191098-44196097 Glycine max
Glyma.10G210000 5.0kb downstream 5.0kb downstream 10406 true Chr10: 44196098-44206503 Glycine max
Glyma.10G210000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 44201504-44206503 Glycine max
Glyma.10G210000 10.0kb upstream 10.0kb upstream 15406 true Chr10: 44186098-44201503 Glycine max
Glyma.10G210000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 44186098-44196097 Glycine max
Glyma.10G210000 10.0kb downstream 10.0kb downstream 15406 true Chr10: 44196098-44211503 Glycine max
Glyma.10G210000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 44201504-44211503 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308978 5265 Fabidae View MSA
124064081 5270 Rosid View MSA
123738784 5271 Pentapetalae View MSA
122793705 5272 Eudicot View MSA
122046741 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121310651 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.311722 0.0 1.55043   Low
cufflinks 1.14155 0.0 4.57921    
cufflinks 3.80562 0.0 13.8377    
cufflinks 2.04266 0.0 7.01623    
cufflinks 8.89775 0.0 27.4597    
cufflinks 26.4978 0.0 82.0679 High High
cufflinks 3.67987 0.0 13.6404    
cufflinks 3.24698 0.0 13.9818    
cufflinks 43.0785 0.0 189.126 High High
cufflinks 0.603        
cufflinks 0.834        
cufflinks 0.819        
cufflinks 0.587        
cufflinks 0.234       Low
cufflinks 17.223     High High
cufflinks 0.483        
cufflinks 0.276        
cufflinks 1.438        
cufflinks 0.487        
cufflinks 0.249        
cufflinks 0.705        
cufflinks 0.322        
cufflinks 0.511        
cufflinks 0.409        
cufflinks 0.389        
cufflinks 0.819        

0 Strain