Gene : Glyma.10G199900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR34568:SF2 - DNA BINDING PROTEIN Genomic Order:  1999
Name:  ? Glyma.10G199900 Secondary Identifier:  ? PAC:30474289
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G199900 0.5kb upstream 0.5kb upstream 3921 true Chr10: 43073022-43076942 Glycine max
Glyma.10G199900 0.5kb upstream 0.5kb upstream 500 false Chr10: 43076443-43076942 Glycine max
Glyma.10G199900 0.5kb downstream 0.5kb downstream 3921 true Chr10: 43072522-43076442 Glycine max
Glyma.10G199900 0.5kb downstream 0.5kb downstream 500 false Chr10: 43072522-43073021 Glycine max
Glyma.10G199900 1.0kb upstream 1.0kb upstream 4421 true Chr10: 43073022-43077442 Glycine max
Glyma.10G199900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43076443-43077442 Glycine max
Glyma.10G199900 1.0kb downstream 1.0kb downstream 4421 true Chr10: 43072022-43076442 Glycine max
Glyma.10G199900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43072022-43073021 Glycine max
Glyma.10G199900 2.0kb upstream 2.0kb upstream 5421 true Chr10: 43073022-43078442 Glycine max
Glyma.10G199900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43076443-43078442 Glycine max
Glyma.10G199900 2.0kb downstream 2.0kb downstream 5421 true Chr10: 43071022-43076442 Glycine max
Glyma.10G199900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43071022-43073021 Glycine max
Glyma.10G199900 5.0kb upstream 5.0kb upstream 8421 true Chr10: 43073022-43081442 Glycine max
Glyma.10G199900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43076443-43081442 Glycine max
Glyma.10G199900 5.0kb downstream 5.0kb downstream 8421 true Chr10: 43068022-43076442 Glycine max
Glyma.10G199900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43068022-43073021 Glycine max
Glyma.10G199900 10.0kb upstream 10.0kb upstream 13421 true Chr10: 43073022-43086442 Glycine max
Glyma.10G199900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43076443-43086442 Glycine max
Glyma.10G199900 10.0kb downstream 10.0kb downstream 13421 true Chr10: 43063022-43076442 Glycine max
Glyma.10G199900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43063022-43073021 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026775 5273 Angiosperm View MSA
122305675 5265 Fabidae View MSA
124060685 5270 Rosid View MSA
123752570 5271 Pentapetalae View MSA
122794894 5272 Eudicot View MSA
121296550 5274 Embryophyte View MSA
123334696 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.48384 0.0 24.3496    
cufflinks 9.36952 0.0 33.0793   High
cufflinks 3.18026 0.0 12.4314   Low
cufflinks 6.06717 0.0 23.0366    
cufflinks 6.04911 0.0 23.0912    
cufflinks 3.17109 0.0 12.4826   Low
cufflinks 9.53491 0.0 33.6425   High
cufflinks 5.8291 0.0 22.3015    
cufflinks 6.41251 0.0 24.1637    
cufflinks 1.76        
cufflinks 0.24       Low
cufflinks 2.418        
cufflinks 2.255        
cufflinks 3.251       High
cufflinks 0.689        
cufflinks 1.266        
cufflinks 0.856        
cufflinks 2.186        
cufflinks 4.015       High
cufflinks 0.853        
cufflinks 0.476       Low
cufflinks 1.093        
cufflinks 2.372        
cufflinks 0.302       Low
cufflinks 1.023        
cufflinks 0.688        

0 Strain