Gene : Glyma.10G200000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12526//PTHR12526:SF354 - GLYCOSYLTRANSFERASE Genomic Order:  2000
Name:  ? Glyma.10G200000 Secondary Identifier:  ? PAC:30477639
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G200000 0.5kb upstream 0.5kb upstream 9224 true Chr10: 43077358-43086581 Glycine max
Glyma.10G200000 0.5kb upstream 0.5kb upstream 500 false Chr10: 43086082-43086581 Glycine max
Glyma.10G200000 0.5kb downstream 0.5kb downstream 9224 true Chr10: 43076858-43086081 Glycine max
Glyma.10G200000 0.5kb downstream 0.5kb downstream 500 false Chr10: 43076858-43077357 Glycine max
Glyma.10G200000 1.0kb upstream 1.0kb upstream 9724 true Chr10: 43077358-43087081 Glycine max
Glyma.10G200000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43086082-43087081 Glycine max
Glyma.10G200000 1.0kb downstream 1.0kb downstream 9724 true Chr10: 43076358-43086081 Glycine max
Glyma.10G200000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43076358-43077357 Glycine max
Glyma.10G200000 2.0kb upstream 2.0kb upstream 10724 true Chr10: 43077358-43088081 Glycine max
Glyma.10G200000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43086082-43088081 Glycine max
Glyma.10G200000 2.0kb downstream 2.0kb downstream 10724 true Chr10: 43075358-43086081 Glycine max
Glyma.10G200000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43075358-43077357 Glycine max
Glyma.10G200000 5.0kb upstream 5.0kb upstream 13724 true Chr10: 43077358-43091081 Glycine max
Glyma.10G200000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43086082-43091081 Glycine max
Glyma.10G200000 5.0kb downstream 5.0kb downstream 13724 true Chr10: 43072358-43086081 Glycine max
Glyma.10G200000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43072358-43077357 Glycine max
Glyma.10G200000 10.0kb upstream 10.0kb upstream 18724 true Chr10: 43077358-43096081 Glycine max
Glyma.10G200000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43086082-43096081 Glycine max
Glyma.10G200000 10.0kb downstream 10.0kb downstream 18724 true Chr10: 43067358-43086081 Glycine max
Glyma.10G200000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43067358-43077357 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309093 5265 Fabidae View MSA
124067437 5270 Rosid View MSA
123740288 5271 Pentapetalae View MSA
122789859 5272 Eudicot View MSA
122043376 5273 Angiosperm View MSA
121346761 5274 Embryophyte View MSA
123380440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.72174 0.0 10.7244    
cufflinks 2.37881 0.0 9.8199    
cufflinks 1.96307 0.0 7.32377   Low
cufflinks 1.96183 0.0 7.2976   Low
cufflinks 4.14827 0.0 15.0254   High
cufflinks 2.89114 0.0 11.2861    
cufflinks 3.22023 0.0 12.1993    
cufflinks 2.73834 0.0 9.35655    
cufflinks 2.89826 0.0 11.3864    
cufflinks 0.723        
cufflinks 0.387       Low
cufflinks 0.927        
cufflinks 1.143       High
cufflinks 1.594       High
cufflinks 0.417        
cufflinks 0.581        
cufflinks 0.352       Low
cufflinks 1.284       High
cufflinks 0.851        
cufflinks 0.51        
cufflinks 0.542        
cufflinks 0.556        
cufflinks 0.468        
cufflinks 0.577        
cufflinks 0.451        
cufflinks 0.658        

0 Strain