Gene : Glyma.10G202800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21596//PTHR21596:SF14 - RIBONUCLEASE P SUBUNIT P38 Genomic Order:  2028
Name:  ? Glyma.10G202800 Secondary Identifier:  ? PAC:30476576
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G202800 0.5kb upstream 0.5kb upstream 5776 true Chr10: 43408767-43414542 Glycine max
Glyma.10G202800 0.5kb upstream 0.5kb upstream 500 false Chr10: 43408767-43409266 Glycine max
Glyma.10G202800 0.5kb downstream 0.5kb downstream 5776 true Chr10: 43409267-43415042 Glycine max
Glyma.10G202800 0.5kb downstream 0.5kb downstream 500 false Chr10: 43414543-43415042 Glycine max
Glyma.10G202800 1.0kb upstream 1.0kb upstream 6276 true Chr10: 43408267-43414542 Glycine max
Glyma.10G202800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43408267-43409266 Glycine max
Glyma.10G202800 1.0kb downstream 1.0kb downstream 6276 true Chr10: 43409267-43415542 Glycine max
Glyma.10G202800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43414543-43415542 Glycine max
Glyma.10G202800 2.0kb upstream 2.0kb upstream 7276 true Chr10: 43407267-43414542 Glycine max
Glyma.10G202800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43407267-43409266 Glycine max
Glyma.10G202800 2.0kb downstream 2.0kb downstream 7276 true Chr10: 43409267-43416542 Glycine max
Glyma.10G202800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43414543-43416542 Glycine max
Glyma.10G202800 5.0kb upstream 5.0kb upstream 10276 true Chr10: 43404267-43414542 Glycine max
Glyma.10G202800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43404267-43409266 Glycine max
Glyma.10G202800 5.0kb downstream 5.0kb downstream 10276 true Chr10: 43409267-43419542 Glycine max
Glyma.10G202800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43414543-43419542 Glycine max
Glyma.10G202800 10.0kb upstream 10.0kb upstream 15276 true Chr10: 43399267-43414542 Glycine max
Glyma.10G202800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43399267-43409266 Glycine max
Glyma.10G202800 10.0kb downstream 10.0kb downstream 15276 true Chr10: 43409267-43424542 Glycine max
Glyma.10G202800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43414543-43424542 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302905 5265 Fabidae View MSA
124074595 5270 Rosid View MSA
123742746 5271 Pentapetalae View MSA
122795667 5272 Eudicot View MSA
122048757 5273 Angiosperm View MSA
121350622 5274 Embryophyte View MSA
123381820 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.16409 0.0 27.9507    
cufflinks 6.21106 0.0 21.4031    
cufflinks 11.8043 0.0 41.5082   High
cufflinks 4.91225 0.0 17.2586   Low
cufflinks 4.8647 0.0 17.2515   Low
cufflinks 5.76852 0.0 19.9793    
cufflinks 7.33199 0.0 25.2486    
cufflinks 5.49445 0.0 19.0967    
cufflinks 8.58392 0.0 29.4031    
cufflinks 2.083       Low
cufflinks 5.473       High
cufflinks 5.234        
cufflinks 3.432        
cufflinks 3.106        
cufflinks 4.59        
cufflinks 4.234        
cufflinks 2.758       Low
cufflinks 3.853        
cufflinks 4.222        
cufflinks 4.429        
cufflinks 5.231        
cufflinks 4.758        
cufflinks 3.819        
cufflinks 6.904     High High
cufflinks 4.17        
cufflinks 3.746        

0 Strain