Gene : Glyma.10G232300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13107 - KARYOGAMY PROTEIN KAR4-RELATED Genomic Order:  2323
Name:  ? Glyma.10G232300 Secondary Identifier:  ? PAC:30474866
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G232300 0.5kb upstream 0.5kb upstream 7224 true Chr10: 46179620-46186843 Glycine max
Glyma.10G232300 0.5kb upstream 0.5kb upstream 500 false Chr10: 46179620-46180119 Glycine max
Glyma.10G232300 0.5kb downstream 0.5kb downstream 7224 true Chr10: 46180120-46187343 Glycine max
Glyma.10G232300 0.5kb downstream 0.5kb downstream 500 false Chr10: 46186844-46187343 Glycine max
Glyma.10G232300 1.0kb upstream 1.0kb upstream 7724 true Chr10: 46179120-46186843 Glycine max
Glyma.10G232300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 46179120-46180119 Glycine max
Glyma.10G232300 1.0kb downstream 1.0kb downstream 7724 true Chr10: 46180120-46187843 Glycine max
Glyma.10G232300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 46186844-46187843 Glycine max
Glyma.10G232300 2.0kb upstream 2.0kb upstream 8724 true Chr10: 46178120-46186843 Glycine max
Glyma.10G232300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 46178120-46180119 Glycine max
Glyma.10G232300 2.0kb downstream 2.0kb downstream 8724 true Chr10: 46180120-46188843 Glycine max
Glyma.10G232300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 46186844-46188843 Glycine max
Glyma.10G232300 5.0kb upstream 5.0kb upstream 11724 true Chr10: 46175120-46186843 Glycine max
Glyma.10G232300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 46175120-46180119 Glycine max
Glyma.10G232300 5.0kb downstream 5.0kb downstream 11724 true Chr10: 46180120-46191843 Glycine max
Glyma.10G232300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 46186844-46191843 Glycine max
Glyma.10G232300 10.0kb upstream 10.0kb upstream 16724 true Chr10: 46170120-46186843 Glycine max
Glyma.10G232300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 46170120-46180119 Glycine max
Glyma.10G232300 10.0kb downstream 10.0kb downstream 16724 true Chr10: 46180120-46196843 Glycine max
Glyma.10G232300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 46186844-46196843 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301130 5265 Fabidae View MSA
124068937 5270 Rosid View MSA
123737308 5271 Pentapetalae View MSA
122789765 5272 Eudicot View MSA
122041791 5273 Angiosperm View MSA
121349708 5274 Embryophyte View MSA
123428450 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.74173 0.0 33.7972    
cufflinks 7.82926 0.0 23.3054    
cufflinks 8.5786 0.0 29.4872    
cufflinks 9.33833 0.0 32.2851    
cufflinks 9.60809 0.0 28.9428    
cufflinks 4.24393 0.0 13.6115   Low
cufflinks 17.0101 0.0 55.8437   High
cufflinks 6.26339 0.0 21.3918    
cufflinks 9.46047 0.0 29.0374    
cufflinks 2.734       Low
cufflinks 2.972       Low
cufflinks 5.253        
cufflinks 3.6        
cufflinks 4.404        
cufflinks 4.193        
cufflinks 6.735       High
cufflinks 2.439       Low
cufflinks 5.526        
cufflinks 4.607        
cufflinks 8.582     High High
cufflinks 3.369        
cufflinks 8.244     High High
cufflinks 4.825        
cufflinks 3.018        
cufflinks 7.692     High High
cufflinks 3.295        

0 Strain