Gene : Glyma.10G223900 G. max Wm82.a2.v1
Defline:  (1 of 19) PF05055 - Protein of unknown function (DUF677) (DUF677) Genomic Order:  2239
Name:  ? Glyma.10G223900 Secondary Identifier:  ? PAC:30474827
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G223900 0.5kb upstream 0.5kb upstream 3027 true Chr10: 45473169-45476195 Glycine max
Glyma.10G223900 0.5kb upstream 0.5kb upstream 500 false Chr10: 45473169-45473668 Glycine max
Glyma.10G223900 0.5kb downstream 0.5kb downstream 3027 true Chr10: 45473669-45476695 Glycine max
Glyma.10G223900 0.5kb downstream 0.5kb downstream 500 false Chr10: 45476196-45476695 Glycine max
Glyma.10G223900 1.0kb upstream 1.0kb upstream 3527 true Chr10: 45472669-45476195 Glycine max
Glyma.10G223900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 45472669-45473668 Glycine max
Glyma.10G223900 1.0kb downstream 1.0kb downstream 3527 true Chr10: 45473669-45477195 Glycine max
Glyma.10G223900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 45476196-45477195 Glycine max
Glyma.10G223900 2.0kb upstream 2.0kb upstream 4527 true Chr10: 45471669-45476195 Glycine max
Glyma.10G223900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 45471669-45473668 Glycine max
Glyma.10G223900 2.0kb downstream 2.0kb downstream 4527 true Chr10: 45473669-45478195 Glycine max
Glyma.10G223900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 45476196-45478195 Glycine max
Glyma.10G223900 5.0kb upstream 5.0kb upstream 7527 true Chr10: 45468669-45476195 Glycine max
Glyma.10G223900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 45468669-45473668 Glycine max
Glyma.10G223900 5.0kb downstream 5.0kb downstream 7527 true Chr10: 45473669-45481195 Glycine max
Glyma.10G223900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 45476196-45481195 Glycine max
Glyma.10G223900 10.0kb upstream 10.0kb upstream 12527 true Chr10: 45463669-45476195 Glycine max
Glyma.10G223900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 45463669-45473668 Glycine max
Glyma.10G223900 10.0kb downstream 10.0kb downstream 12527 true Chr10: 45473669-45486195 Glycine max
Glyma.10G223900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 45476196-45486195 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299786 5265 Fabidae View MSA
124070195 5270 Rosid View MSA
123749036 5271 Pentapetalae View MSA
122795133 5272 Eudicot View MSA
122051174 5273 Angiosperm View MSA
121347879 5274 Embryophyte View MSA
123380662 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0636938 0.0 0.259856 Low  
cufflinks 0.822603 0.0 2.99699   High
cufflinks 0.0797922 0.0 0.32206 Low  
cufflinks 0.0145636 0.0 0.0669075 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.362841 0.0 1.38269    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0165962 0.0 0.0750644 Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.122       High
cufflinks 0.006     Low Low
cufflinks 0.039     Low  
cufflinks 0.132       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.046     Low  
cufflinks 0.037     Low  
cufflinks 0.007     Low Low
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low

0 Strain