Gene : Glyma.10G276500 G. max Wm82.a2.v1
Defline:  (1 of 15) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) Genomic Order:  2765
Name:  ? Glyma.10G276500 Secondary Identifier:  ? PAC:30475141
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G276500 0.5kb upstream 0.5kb upstream 6003 true Chr10: 49886813-49892815 Glycine max
Glyma.10G276500 0.5kb upstream 0.5kb upstream 500 false Chr10: 49886813-49887312 Glycine max
Glyma.10G276500 0.5kb downstream 0.5kb downstream 6003 true Chr10: 49887313-49893315 Glycine max
Glyma.10G276500 0.5kb downstream 0.5kb downstream 500 false Chr10: 49892816-49893315 Glycine max
Glyma.10G276500 1.0kb upstream 1.0kb upstream 6503 true Chr10: 49886313-49892815 Glycine max
Glyma.10G276500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 49886313-49887312 Glycine max
Glyma.10G276500 1.0kb downstream 1.0kb downstream 6503 true Chr10: 49887313-49893815 Glycine max
Glyma.10G276500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 49892816-49893815 Glycine max
Glyma.10G276500 2.0kb upstream 2.0kb upstream 7503 true Chr10: 49885313-49892815 Glycine max
Glyma.10G276500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 49885313-49887312 Glycine max
Glyma.10G276500 2.0kb downstream 2.0kb downstream 7503 true Chr10: 49887313-49894815 Glycine max
Glyma.10G276500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 49892816-49894815 Glycine max
Glyma.10G276500 5.0kb upstream 5.0kb upstream 10503 true Chr10: 49882313-49892815 Glycine max
Glyma.10G276500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 49882313-49887312 Glycine max
Glyma.10G276500 5.0kb downstream 5.0kb downstream 10503 true Chr10: 49887313-49897815 Glycine max
Glyma.10G276500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 49892816-49897815 Glycine max
Glyma.10G276500 10.0kb upstream 10.0kb upstream 15503 true Chr10: 49877313-49892815 Glycine max
Glyma.10G276500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 49877313-49887312 Glycine max
Glyma.10G276500 10.0kb downstream 10.0kb downstream 15503 true Chr10: 49887313-49902815 Glycine max
Glyma.10G276500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 49892816-49902815 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122244763 5265 Fabidae Singleton cluster - no MSA
124041890 5270 Rosid View MSA
123647205 5271 Pentapetalae View MSA
122798260 5272 Eudicot View MSA
122049541 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.888 0.0 44.3416    
cufflinks 15.6489 0.0 53.8407   High
cufflinks 14.654 0.0 48.9661   High
cufflinks 10.0039 0.0 33.6003   Low
cufflinks 13.4935 0.0 45.5406    
cufflinks 10.5829 0.0 37.5604    
cufflinks 11.3452 0.0 38.4272    
cufflinks 11.3208 0.0 39.885    
cufflinks 9.79722 0.0 29.4677   Low
cufflinks 2.085        
cufflinks 2.097        
cufflinks 3.183        
cufflinks 2.464        
cufflinks 3.283        
cufflinks 1.462       Low
cufflinks 3.732       High
cufflinks 1.827       Low
cufflinks 3.058        
cufflinks 3.617        
cufflinks 3.869       High
cufflinks 2.335        
cufflinks 3.851       High
cufflinks 3.415        
cufflinks 2.615        
cufflinks 3.716        
cufflinks 1.891       Low

0 Strain