Protein Family : RNA recognition motif containing protein, expressed 122049541

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  101

101 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
28462.t000001 (1 of 2) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) R. communis v0.1 5203   28462: 12635-17837
Cucsa.317370 (1 of 1) PTHR24012:SF459 - RNA-BINDING PROTEIN 4F C. sativus v1.0 4209   scaffold03052: 49188-53396
orange1.1g023559m.g (1 of 1) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains C. sinensis v1.1 5224   scaffold00274: 13375-18598
AT5G04280 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) A. thaliana TAIR10 3389   Chr5: 1192274-1195662
AT1G60650 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) A. thaliana TAIR10 2529   Chr1: 22339809-22342337
Thhalv10023624m.g (1 of 10) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) E. salsugineum v1.0 2808   scaffold_8: 3909026-3911833
Ciclev10032520m.g (1 of 1) PTHR24012:SF459 - RNA-BINDING PROTEIN 4F C. clementina v1.0 5337   scaffold_4: 6975583-6980919
Lus10038683.g (1 of 14) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) L. usitatissimum v1.0 1107   scaffold37: 1598021-1599127
Lus10037950.g (1 of 1) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains L. usitatissimum v1.0 1976   scaffold475: 532820-534795
Lus10000128.g (1 of 14) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) L. usitatissimum v1.0 582   C8353861: 41-622
Gorai.011G235100 (1 of 8) KOG0114 - Predicted RNA-binding protein (RRM superfamily) G. raimondii v2.1 4573   Chr11: 55510374-55514946
Thecc1EG043324 (1 of 1) PTHR24012//PTHR24012:SF459 - FAMILY NOT NAMED // RNA-BINDING PROTEIN 4F T. cacao v1.1 6504   scaffold_10r: 5245264-5251767
Migut.F01713 (1 of 8) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) M. guttatus v2.0 4197   scaffold_6: 16933576-16937772
Araha.0034s0005 (1 of 2) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains A. halleri v1.1 3362   Scaffold34: 25798-29159
Araha.9271s0004 (1 of 2) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains A. halleri v1.1 2459   Scaffold9271: 9153-11611
Cagra.9217s0008 (1 of 2) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains C. grandiflora v1.1 3352   Scaffold9217: 30336-33687
Cagra.12428s0007 (1 of 2) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains C. grandiflora v1.1 2409   Scaffold12428: 28689-31097
Glyma.10G276500 (1 of 15) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) G. max Wm82.a2.v1 5503   Chr10: 49887313-49892815
Glyma.20G113200 (1 of 1) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains G. max Wm82.a2.v1 5503   Chr20: 35520303-35525805
Brara.A02479 (1 of 15) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) B. rapa FPsc v1.3 804   A01: 20043550-20044353
Brara.C00156 (1 of 14) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) B. rapa FPsc v1.3 3098   A03: 697430-700527
Bostr.2128s0019 (1 of 2) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains B. stricta v1.2 3500   Scaffold2128: 102060-105559
Bostr.10040s0149 (1 of 1) KOG0107//KOG0109 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains B. stricta v1.2 2391   Scaffold10040: 1295890-1298280
SapurV1A.0213s0230 (1 of 1) PTHR24012//PTHR24012:SF459 - FAMILY NOT NAMED // RNA-BINDING PROTEIN 4F S. purpurea v1.0 5164   chr10: 17751018-17756181
SapurV1A.0411s0100 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) S. purpurea v1.0 4768   chr08: 1814859-1819626
evm_27.TU.AmTr_v1.0_scaffold00002.357 (1 of 10) PTHR23139 - RNA-BINDING PROTEIN A. trichopoda v1.0 720   AmTr_v1.0_scaffold00002: 6450736-6451455
Traes_2AS_915BF7045 (1 of 7) PTHR24012:SF308 - PROTEIN Y55F3AM.3, ISOFORM A T. aestivum v2.2 3865   ta_iwgsc_2as_v1_5260099: 5089-8953
Traes_2BS_FCA111C091 (1 of 7) PTHR24012:SF308 - PROTEIN Y55F3AM.3, ISOFORM A T. aestivum v2.2 2812   ta_iwgsc_2bs_v1_5177053: 1647-4458
Traes_2BS_FCA111C09 (1 of 7) PTHR24012:SF308 - PROTEIN Y55F3AM.3, ISOFORM A T. aestivum v2.2 2812   ta_iwgsc_2bs_v1_5185206: 2893-5704
Traes_2DS_4A3C77BC3 (1 of 7) PTHR24012:SF308 - PROTEIN Y55F3AM.3, ISOFORM A T. aestivum v2.2 3717   ta_iwgsc_2ds_v1_5382485: 3105-6821

101 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
28462.m000127 R. communis v0.1 122049541 RNA recognition motif containing protein, expressed 1 5273 Angiosperm
AT1G60650.1 A. thaliana TAIR10 122049541 RNA recognition motif containing protein, expressed 2 5273 Angiosperm
AT5G04280.1 A. thaliana TAIR10 122049541 RNA recognition motif containing protein, expressed 2 5273 Angiosperm
Thhalv10023624m E. salsugineum v1.0 122049541 RNA recognition motif containing protein, expressed 1 5273 Angiosperm
Lus10037950 L. usitatissimum v1.0 122049541 RNA recognition motif containing protein, expressed 3 5273 Angiosperm
Araha.9271s0004.1.p A. halleri v1.1 122049541 RNA recognition motif containing protein, expressed 2 5273 Angiosperm
Cagra.9217s0008.1.p C. grandiflora v1.1 122049541 RNA recognition motif containing protein, expressed 2 5273 Angiosperm
Brara.C00156.1.p B. rapa FPsc v1.3 122049541 RNA recognition motif containing protein, expressed 2 5273 Angiosperm
Bostr.2128s0019.1.p B. stricta v1.2 122049541 RNA recognition motif containing protein, expressed 2 5273 Angiosperm
SapurV1A.0213s0230.1.p S. purpurea v1.0 122049541 RNA recognition motif containing protein, expressed 2 5273 Angiosperm
SapurV1A.0411s0100.1.p S. purpurea v1.0 122049541 RNA recognition motif containing protein, expressed 2 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00002.357 A. trichopoda v1.0 122049541 RNA recognition motif containing protein, expressed 1 5273 Angiosperm
Traes_2DS_4A3C77BC3.1 T. aestivum v2.2 122049541 RNA recognition motif containing protein, expressed 7 5273 Angiosperm
Traes_4DS_0EAC519C1.2 T. aestivum v2.2 122049541 RNA recognition motif containing protein, expressed 7 5273 Angiosperm
Traes_2BS_FCA111C09.1 T. aestivum v2.2 122049541 RNA recognition motif containing protein, expressed 7 5273 Angiosperm
Traes_2AS_915BF7045.2 T. aestivum v2.2 122049541 RNA recognition motif containing protein, expressed 7 5273 Angiosperm
Traes_2BS_FCA111C091.1 T. aestivum v2.2 122049541 RNA recognition motif containing protein, expressed 7 5273 Angiosperm
Traes_4AL_464720845.1 T. aestivum v2.2 122049541 RNA recognition motif containing protein, expressed 7 5273 Angiosperm
Traes_4BS_DB47471FB.1 T. aestivum v2.2 122049541 RNA recognition motif containing protein, expressed 7 5273 Angiosperm
Eucgr.J01044.1.p E. grandis v2.0 122049541 RNA recognition motif containing protein, expressed 1 5273 Angiosperm
GSMUA_Achr4P28550_001 M. acuminata v1 122049541 RNA recognition motif containing protein, expressed 2 5273 Angiosperm
GSMUA_Achr4P22370_001 M. acuminata v1 122049541 RNA recognition motif containing protein, expressed 2 5273 Angiosperm
Kalax.0139s0055.1.p K. laxiflora v1.1 122049541 RNA recognition motif containing protein, expressed 5 5273 Angiosperm
Kalax.0483s0019.1.p K. laxiflora v1.1 122049541 RNA recognition motif containing protein, expressed 5 5273 Angiosperm
Kalax.0286s0014.1.p K. laxiflora v1.1 122049541 RNA recognition motif containing protein, expressed 5 5273 Angiosperm
Kalax.1005s0005.1.p K. laxiflora v1.1 122049541 RNA recognition motif containing protein, expressed 5 5273 Angiosperm
Seita.2G062600.1.p S. italica v2.2 122049541 RNA recognition motif containing protein, expressed 2 5273 Angiosperm
Bradi1g12460.1.p B. distachyon v3.1 122049541 RNA recognition motif containing protein, expressed 2 5273 Angiosperm
Bradi1g55020.1.p B. distachyon v3.1 122049541 RNA recognition motif containing protein, expressed 2 5273 Angiosperm
Brast06G192900.1.p B. stacei v1.1 122049541 RNA recognition motif containing protein, expressed 2 5273 Angiosperm