Gene : Glyma.10G279800 G. max Wm82.a2.v1
Defline:  (1 of 2) 4.1.1.33 - Diphosphomevalonate decarboxylase / Mevalonate pyrophosphate decarboxylase Genomic Order:  2798
Name:  ? Glyma.10G279800 Secondary Identifier:  ? PAC:30478053
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5910 Glycine max pathologic  
Gmax PWY-922 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G279800 0.5kb upstream 0.5kb upstream 4554 true Chr10: 50121343-50125896 Glycine max
Glyma.10G279800 0.5kb upstream 0.5kb upstream 500 false Chr10: 50125397-50125896 Glycine max
Glyma.10G279800 0.5kb downstream 0.5kb downstream 4554 true Chr10: 50120843-50125396 Glycine max
Glyma.10G279800 0.5kb downstream 0.5kb downstream 500 false Chr10: 50120843-50121342 Glycine max
Glyma.10G279800 1.0kb upstream 1.0kb upstream 5054 true Chr10: 50121343-50126396 Glycine max
Glyma.10G279800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 50125397-50126396 Glycine max
Glyma.10G279800 1.0kb downstream 1.0kb downstream 5054 true Chr10: 50120343-50125396 Glycine max
Glyma.10G279800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 50120343-50121342 Glycine max
Glyma.10G279800 2.0kb upstream 2.0kb upstream 6054 true Chr10: 50121343-50127396 Glycine max
Glyma.10G279800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 50125397-50127396 Glycine max
Glyma.10G279800 2.0kb downstream 2.0kb downstream 6054 true Chr10: 50119343-50125396 Glycine max
Glyma.10G279800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 50119343-50121342 Glycine max
Glyma.10G279800 5.0kb upstream 5.0kb upstream 9054 true Chr10: 50121343-50130396 Glycine max
Glyma.10G279800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 50125397-50130396 Glycine max
Glyma.10G279800 5.0kb downstream 5.0kb downstream 9054 true Chr10: 50116343-50125396 Glycine max
Glyma.10G279800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 50116343-50121342 Glycine max
Glyma.10G279800 10.0kb upstream 10.0kb upstream 14054 true Chr10: 50121343-50135396 Glycine max
Glyma.10G279800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 50125397-50135396 Glycine max
Glyma.10G279800 10.0kb downstream 10.0kb downstream 14054 true Chr10: 50111343-50125396 Glycine max
Glyma.10G279800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 50111343-50121342 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040965 5273 Angiosperm View MSA
122304155 5265 Fabidae View MSA
124066077 5270 Rosid View MSA
123742848 5271 Pentapetalae View MSA
122793764 5272 Eudicot View MSA
121347307 5274 Embryophyte View MSA
123380524 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.45443 0.0 19.5334   Low
cufflinks 8.47576 0.0 36.1585    
cufflinks 3.91156 0.0 20.2306   Low
cufflinks 4.81169 0.0 23.417    
cufflinks 15.0845 0.0 63.0435   High
cufflinks 10.8459 0.0 47.0789    
cufflinks 8.5059 0.0 35.5596    
cufflinks 6.97009 0.0 29.9887    
cufflinks 6.04464 0.0 27.1678    
cufflinks 1.275        
cufflinks 0.202       Low
cufflinks 0.903        
cufflinks 2.471       High
cufflinks 3.277       High
cufflinks 0.214       Low
cufflinks 1.15        
cufflinks 0.545        
cufflinks 1.137        
cufflinks 2.272       High
cufflinks 0.942        
cufflinks 0.351       Low
cufflinks 1.079        
cufflinks 1.697        
cufflinks 0.262       Low
cufflinks 1.089        
cufflinks 0.549        

0 Strain