Gene : Glyma.10G269300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12547:SF60 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14-RELATED Genomic Order:  2693
Name:  ? Glyma.10G269300 Secondary Identifier:  ? PAC:30476987
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G269300 0.5kb upstream 0.5kb upstream 3668 true Chr10: 49171523-49175190 Glycine max
Glyma.10G269300 0.5kb upstream 0.5kb upstream 500 false Chr10: 49174691-49175190 Glycine max
Glyma.10G269300 0.5kb downstream 0.5kb downstream 3668 true Chr10: 49171023-49174690 Glycine max
Glyma.10G269300 0.5kb downstream 0.5kb downstream 500 false Chr10: 49171023-49171522 Glycine max
Glyma.10G269300 1.0kb upstream 1.0kb upstream 4168 true Chr10: 49171523-49175690 Glycine max
Glyma.10G269300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 49174691-49175690 Glycine max
Glyma.10G269300 1.0kb downstream 1.0kb downstream 4168 true Chr10: 49170523-49174690 Glycine max
Glyma.10G269300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 49170523-49171522 Glycine max
Glyma.10G269300 2.0kb upstream 2.0kb upstream 5168 true Chr10: 49171523-49176690 Glycine max
Glyma.10G269300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 49174691-49176690 Glycine max
Glyma.10G269300 2.0kb downstream 2.0kb downstream 5168 true Chr10: 49169523-49174690 Glycine max
Glyma.10G269300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 49169523-49171522 Glycine max
Glyma.10G269300 5.0kb upstream 5.0kb upstream 8168 true Chr10: 49171523-49179690 Glycine max
Glyma.10G269300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 49174691-49179690 Glycine max
Glyma.10G269300 5.0kb downstream 5.0kb downstream 8168 true Chr10: 49166523-49174690 Glycine max
Glyma.10G269300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 49166523-49171522 Glycine max
Glyma.10G269300 10.0kb upstream 10.0kb upstream 13168 true Chr10: 49171523-49184690 Glycine max
Glyma.10G269300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 49174691-49184690 Glycine max
Glyma.10G269300 10.0kb downstream 10.0kb downstream 13168 true Chr10: 49161523-49174690 Glycine max
Glyma.10G269300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 49161523-49171522 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307785 5265 Fabidae View MSA
124071931 5270 Rosid View MSA
123741558 5271 Pentapetalae View MSA
122789151 5272 Eudicot View MSA
122047448 5273 Angiosperm View MSA
121350535 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.312478 0.0 1.57553    
cufflinks 0.413501 0.0 2.0144    
cufflinks 0.227263 0.0 1.11824   Low
cufflinks 5.40828 0.0 22.1383   High
cufflinks 1.73909 0.0 8.53093    
cufflinks 0.303217 0.0 1.51197    
cufflinks 1.73639 0.0 9.68803    
cufflinks 10.8418 0.0 38.3316   High
cufflinks 1.69424 0.0 8.48445    
cufflinks 1.333       High
cufflinks 0.102        
cufflinks 0.04     Low Low
cufflinks 0.475       High
cufflinks 0.102        
cufflinks 0.039     Low Low
cufflinks 0.102        
cufflinks 0.322        
cufflinks 0.093     Low  
cufflinks 0.24        
cufflinks 0.076     Low  
cufflinks 0.188        
cufflinks 0.095        
cufflinks 0.073     Low  
cufflinks 0.123        
cufflinks 0.086     Low  
cufflinks 0.192        

0 Strain