Gene : Glyma.10G261400 G. max Wm82.a2.v1
Defline:  (1 of 5) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase Genomic Order:  2614
Name:  ? Glyma.10G261400 Secondary Identifier:  ? PAC:30476780
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax SER-GLYSYN-PWY Glycine max pathologic  
Gmax SERSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G261400 0.5kb upstream 0.5kb upstream 3690 true Chr10: 48650467-48654156 Glycine max
Glyma.10G261400 0.5kb upstream 0.5kb upstream 500 false Chr10: 48653657-48654156 Glycine max
Glyma.10G261400 0.5kb downstream 0.5kb downstream 3690 true Chr10: 48649967-48653656 Glycine max
Glyma.10G261400 0.5kb downstream 0.5kb downstream 500 false Chr10: 48649967-48650466 Glycine max
Glyma.10G261400 1.0kb upstream 1.0kb upstream 4190 true Chr10: 48650467-48654656 Glycine max
Glyma.10G261400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 48653657-48654656 Glycine max
Glyma.10G261400 1.0kb downstream 1.0kb downstream 4190 true Chr10: 48649467-48653656 Glycine max
Glyma.10G261400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 48649467-48650466 Glycine max
Glyma.10G261400 2.0kb upstream 2.0kb upstream 5190 true Chr10: 48650467-48655656 Glycine max
Glyma.10G261400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 48653657-48655656 Glycine max
Glyma.10G261400 2.0kb downstream 2.0kb downstream 5190 true Chr10: 48648467-48653656 Glycine max
Glyma.10G261400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 48648467-48650466 Glycine max
Glyma.10G261400 5.0kb upstream 5.0kb upstream 8190 true Chr10: 48650467-48658656 Glycine max
Glyma.10G261400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 48653657-48658656 Glycine max
Glyma.10G261400 5.0kb downstream 5.0kb downstream 8190 true Chr10: 48645467-48653656 Glycine max
Glyma.10G261400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 48645467-48650466 Glycine max
Glyma.10G261400 10.0kb upstream 10.0kb upstream 13190 true Chr10: 48650467-48663656 Glycine max
Glyma.10G261400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 48653657-48663656 Glycine max
Glyma.10G261400 10.0kb downstream 10.0kb downstream 13190 true Chr10: 48640467-48653656 Glycine max
Glyma.10G261400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 48640467-48650466 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305922 5265 Fabidae View MSA
124071894 5270 Rosid View MSA
123750282 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.7104 0.0 116.229 High  
cufflinks 26.2281 0.0 71.5594 High  
cufflinks 4.75003 0.0 13.4236   Low
cufflinks 33.1165 0.0 92.1867 High  
cufflinks 47.0784 0.0 137.49 High  
cufflinks 11.1512 0.0 29.8011    
cufflinks 15.746 0.0 42.0806    
cufflinks 27.3447 0.0 74.9189 High  
cufflinks 49.7643 0.0 145.938 High  
cufflinks 13.259     High  
cufflinks 10.606     High  
cufflinks 6.655        
cufflinks 32.894     High High
cufflinks 47.713     High High
cufflinks 40.2     High High
cufflinks 9.289     High  
cufflinks 7.083     High  
cufflinks 8.773     High  
cufflinks 23.814     High  
cufflinks 3.964       Low
cufflinks 30.6     High High
cufflinks 6.606        
cufflinks 11.385     High  
cufflinks 12.285     High  
cufflinks 5.58       Low
cufflinks 28.916     High High

0 Strain